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Name : CP0316 (CP0316) Accession : NP_444865.1 Strain : Chlamydophila pneumoniae AR39 Genome accession: NC_002179 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 356843 - 359380 bp Length : 2538 bp Strand : - Note : similar to SP:P31541; identified by sequence similarity DNA sequence : ATGTTTGAGAAGTTCACTAATAGAGCAAAACAAGTCATTAAACTGGCGAAAAAGGAGGCTCAGCGTTTAAATCATAACTA CCTGGGTACTGAGCACATCCTGCTTGGTCTTCTCAAACTTGGTCAAGGGGTAGCTGTTAATGTATTACGCAACCTCGGTA TAGATTTTGATACGGCACGGCAAGAGGTGGAACGCCTGATTGGTTATGGTCCAGAAATTCAAGTCTACGGAGACCCTGCC CTTACAGGAAGAGTAAAAAAATCTTTTGAATCAGCAAATGAAGAGGCCAGCCTTTTAGAGCACAATTATGTCGGGACGGA GCATTTACTCTTAGGGATCCTACATCAATCAGATAGTGTCGCTCTTCAGGTATTAGAAAACTTACATATCGATCCAAGAG AGGTTCGTAAGGAAATTCTTAAAGAATTAGAGACCTTCAATCTACAACTTCCTCCTTCGTCGTCGTCTTCTTCCTCATCC TCTCGAAGCAACCCTTCATCTTCAAAATCTCCTTTAGGTCATAGCTTAGGTTCTGACAAAAACGAAAAGCTTTCTGCTCT GAAAGCATATGGTTATGATTTAACGGAGATGGTCCGAGAGTCTAAGCTCGATCCTGTCATTGGTCGTTCTTCAGAAGTCG AACGGTTGATTTTGATTCTTTGCCGAAGAAGAAAAAACAATCCTGTACTTATTGGAGAAGCTGGAGTTGGTAAGACTGCA ATTGTTGAGGGTCTGGCTCAAAAAATCATTCTGAATGAGGTTCCTGATGCCTTACGGAAAAAGCGACTGATTACTCTAGA TCTAGCATTAATGATTGCTGGAACAAAATATCGAGGGCAATTTGAGGAACGGATCAAAGCTGTCATGGATGAAGTTCGCA AGCATGGAAACATCTTGCTCTTCATTGACGAGCTCCACACGATTGTAGGAGCAGGAGCAGCTGAAGGTGCTATCGATGCT TCAAACATTTTAAAACCTGCGTTAGCGCGAGGTGAAATTCAGTGTATTGGAGCAACTACGATAGATGAGTATCGCAAGCA CATAGAAAAAGACGCAGCTTTAGAACGTCGTTTCCAAAAAATCGTGGTTCACCCTCCTAGTGTAGATGAGACTATTGAGA TTTTACGTGGCCTCAAGAAAAAGTATGAAGAACATCACAATGTCTTCATTACTGAAGAAGCTTTAAAAGCAGCTGCGACT CTTTCTGATCAATATGTTCATGGACGTTTCCTCCCTGATAAAGCAATAGATCTTTTAGATGAAGCTGGGGCTCGTGTCCG TGTGAATACAATGGGTCAGCCTACAGATTTAATGAAGCTAGAGGCTGAAATCGAAAATACAAAATTGGCCAAAGAGCAGG CCATTGGAACTCAAGAATACGAAAAAGCTGCAGGTTTACGTGATGAAGAGAAAAAACTTCGCGAACGTCTGCAAAGTATG AAACAGGAATGGGAAAATCATAAAGAAGAGCACCAAGTTCCTGTAGATGAAGAAGCAGTCGCTCAGGTAGTTTCTCTACA AACAGGAATTCCCTCAGCAAGGCTCACAGAAGCTGAAAGTGAGAAGCTTCTGAAGTTAGAAGACACGTTAAGAAGAAAAG TCATTGGTCAAAATGATGCCGTTACCAGCATTTGCCGTGCCATCCGACGTTCTCGAACAGGGATCAAAGATCCTAACCGA CCTACGGGCTCCTTCCTATTCCTTGGGCCTACCGGTGTAGGGAAAAGCCTGCTCGCCCAACAAATTGCTATAGAGATGTT CGGTGGTGAAGACGCTCTGATTCAGGTAGACATGTCAGAGTACATGGAGAAATTTGCTGCTACCAAGATGATGGGATCAC CTCCAGGATATGTAGGTCATGAAGAAGGGGGCCACCTTACGGAACAGGTACGTCGCCGTCCTTACTGCGTTGTTCTCTTT GATGAGATAGAAAAGGCACACCCAGACATTATGGACCTGATGTTGCAAATTTTAGAGCAAGGACGTCTTACTGATTCTTT TGGTCGCAAAGTGGATTTCCGTCATGCCATTATTATCATGACCTCCAATTTGGGAGCTGATCTCATTCGTAAAAGCGGAG AAATTGGTTTTGGCTTGAAGTCCCATATGGACTATAAGGTCATCCAAGAGAAAATCGAACATGCTATGAAGAAACACTTA AAGCCTGAGTTCATTAACCGTTTGGATGAAAGTGTGATTTTCCGTCCCCTCGAGAAAGAATCTCTATCGGAGATCATCCA TTTAGAGATCAACAAACTGGACTCGAGACTGAAAAACTACCAAATGGCTTTGAACATCCCAGACTCTGTGATTTCCTTCC TAGTAACGAAGGGGCATTCTCCAGAAATGGGAGCACGTCCTCTACGCCGTGTCATTGAGCAGTACCTTGAAGATCCTCTA GCGGAGCTCTTGCTTAAAGAGTCCTGCCGTCAAGAAGCTCGCAAGCTACGAGCAACCTTGGTTGAAAATCGCGTTGCCTT TGAAAGGGAAGAAGAGGAGCAGGAAGCTGCTCTCCCTAGCCCTCACTTGGAATCATAG Protein sequence : MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGIDFDTARQEVERLIGYGPEIQVYGDPA LTGRVKKSFESANEEASLLEHNYVGTEHLLLGILHQSDSVALQVLENLHIDPREVRKEILKELETFNLQLPPSSSSSSSS SRSNPSSSKSPLGHSLGSDKNEKLSALKAYGYDLTEMVRESKLDPVIGRSSEVERLILILCRRRKNNPVLIGEAGVGKTA IVEGLAQKIILNEVPDALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDA SNILKPALARGEIQCIGATTIDEYRKHIEKDAALERRFQKIVVHPPSVDETIEILRGLKKKYEEHHNVFITEEALKAAAT LSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPTDLMKLEAEIENTKLAKEQAIGTQEYEKAAGLRDEEKKLRERLQSM KQEWENHKEEHQVPVDEEAVAQVVSLQTGIPSARLTEAESEKLLKLEDTLRRKVIGQNDAVTSICRAIRRSRTGIKDPNR PTGSFLFLGPTGVGKSLLAQQIAIEMFGGEDALIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLF DEIEKAHPDIMDLMLQILEQGRLTDSFGRKVDFRHAIIIMTSNLGADLIRKSGEIGFGLKSHMDYKVIQEKIEHAMKKHL KPEFINRLDESVIFRPLEKESLSEIIHLEINKLDSRLKNYQMALNIPDSVISFLVTKGHSPEMGARPLRRVIEQYLEDPL AELLLKESCRQEARKLRATLVENRVAFEREEEEQEAALPSPHLES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CP0316 | NP_444865.1 | ATP-dependent Clp protease ATP-binding protein | VFG0079 | Protein | 0.0 | 51 |
| CP0316 | NP_444865.1 | ATP-dependent Clp protease ATP-binding protein | VFG0080 | Protein | 1e-143 | 50 |
