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Name : CP1055 (CP1055) Accession : NP_445592.1 Strain : Chlamydophila pneumoniae AR39 Genome accession: NC_002179 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1144337 - 1145827 bp Length : 1491 bp Strand : - Note : similar to SP:Q00512 GB:X62666 PID:45434; identified by sequence similarity DNA sequence : ATGGCTGCTAGTATTTTATCTCAGGAGCTTTTGGATATCCTTCCTTATACTTTTTTAAAGAAACACTGTCTTCTCCCTAT TGAAGAGAGTAGTGAGGCTATTACTATAGCCCATGCTACCGCGACTTCAGTCATTGCTCAAGATGAAGTCAAATTGTTAA TAAAAAAGCCTGTGCGTTTCGTTCTAAAAGAGGAATCGGAGATTCTGCAGCGCTTACAGCAGCTCTACAGCAATCGGGAA GGTAATGTTTCCGATATGTTGTTAACAATGAAAGAGGAAGATGGCACTACGATTTCGGAAGAAGAAGATCTTCTGGAGAC TACGGATACGATCCCAGTCGTACGCTTGTTGAACTGGATTCTGAAAGAAGCGATTGAAGAGCGCGCTTCGGACATTCATT TTGAGCCTTGTGAGGATTCTATGAGAATCCGCTACCGCATTGATGGTGTGCTTCACGATCGTCATTCCCCACCTTCCCAC CTGCGTTCGGCATTAACCACTCGGCTTAAAGTCCTCGCAAAGATGGATATTGCGGAGCACCGTCTTCCTCAAGACGGGCG TATTAAGATCCATATTGGTGGTCAGGAAGTGGACATGCGTGTCAGCACGGTTCCCGTGATTTATGGCGAGCGTGTTGTTC TTCGTATTTTAGATAAGCGCAATGTCATTTTGGATATCGCGGGCTTGCATATGCCTAAGGGTACCGAAATACTCTTTAAA GATACCATAACAGCTCCTGAAGGGATCCTTCTGGTTACAGGACCTACAGGCAGTGGGAAAACTACGACCCTCTACAGTGT ATTACAAGAGCTTAAGGGACCTTTAACAAATATCATGACGATCGAAGATCCTCCAGAGTATAAACTGCCTGGAATTGCTC AGATTGCTGTGAAGCCTAAAATTGGGCTGACTTTCGCACGAGGGTTACGGCATTTACTGCGTCAAGATCCCGATATCCTT ATGGTCGGAGAAATCCGAGATCAGGAAACTGCAGAAATCGCAATACAAGCAGCATTGACTGGGCATTTGGTAGTGAGCAC GCTCCATACGAATGACGCTATTTCTGCGATTCCCCGTCTTCTGGATATGGGGATAGAATCCTATTTGTTATCGGCAACGC TCGTTGGCGTGGTTGCCCAGAGGCTGGTGCGAACCATTTGTCCCTATTGTAAGGTCGCTTATACTCCTGAGAATCAGGAA AAATCTTTTCTAGCTTCTCTAGGGAAAGATACAGAAATGCCTTTATATCGGGGGCAAGGGTGCGTGCATTGTTTCCGTTC CGGATATAAAGGAAGACAGGGAATTTACGAATTTTTACGCCCGAATACACTATTTCGTTCAGAAGTAGCCTCAAACCGCC CCTATCATATTTTACGAGAAACTGCAGAACAAAACGGATTCTTACCGATCTTAGAGCACGGCATCGCTCTTGCTGTATCT GGTGAGACTACCTTAGCAGAAGTCTTAAGAGTTACCAAGCGCTGTGATTAG Protein sequence : MAASILSQELLDILPYTFLKKHCLLPIEESSEAITIAHATATSVIAQDEVKLLIKKPVRFVLKEESEILQRLQQLYSNRE GNVSDMLLTMKEEDGTTISEEEDLLETTDTIPVVRLLNWILKEAIEERASDIHFEPCEDSMRIRYRIDGVLHDRHSPPSH LRSALTTRLKVLAKMDIAEHRLPQDGRIKIHIGGQEVDMRVSTVPVIYGERVVLRILDKRNVILDIAGLHMPKGTEILFK DTITAPEGILLVTGPTGSGKTTTLYSVLQELKGPLTNIMTIEDPPEYKLPGIAQIAVKPKIGLTFARGLRHLLRQDPDIL MVGEIRDQETAEIAIQAALTGHLVVSTLHTNDAISAIPRLLDMGIESYLLSATLVGVVAQRLVRTICPYCKVAYTPENQE KSFLASLGKDTEMPLYRGQGCVHCFRSGYKGRQGIYEFLRPNTLFRSEVASNRPYHILRETAEQNGFLPILEHGIALAVS GETTLAEVLRVTKRCD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-88 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-88 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CP1055 | NP_445592.1 | general secretion pathway protein E | VFG0182 | Protein | 6e-91 | 52 |
| CP1055 | NP_445592.1 | general secretion pathway protein E | VFG2426 | Protein | 8e-72 | 46 |
| CP1055 | NP_445592.1 | general secretion pathway protein E | VFG1876 | Protein | 3e-90 | 45 |
| CP1055 | NP_445592.1 | general secretion pathway protein E | VFG2048 | Protein | 1e-88 | 45 |
| CP1055 | NP_445592.1 | general secretion pathway protein E | VFG1880 | Protein | 3e-77 | 44 |
