Gene Information

Name : peb3 (Cj0289c)
Accession : YP_002343730.1
Strain : Campylobacter jejuni NCTC 11168
Genome accession: NC_002163
Putative virulence/resistance : Virulence
Product : major antigenic peptide PEB3
Function : -
COG functional category : R : General function prediction only
COG ID : COG4588
EC number : -
Position : 266622 - 267374 bp
Length : 753 bp
Strand : -
Note : Original (2000) note: Cj0289c, peb3, major antigenic peptide PEB3, len: 250 aa; 94.9% identical to TR:G234575, sequenced by direct peptide sequencing; see: Pei at al. J. Biol. Chem. 266:16363-16369 (1991). Also similar to TR:Q57410 (EMBL:U39068) Vibrio ch

DNA sequence :
ATGAAAAAAATTATTACTTTATTTGGTGCATGTGCCTTAGCTTTTAGTATGGCAAATGCAGATGTAAACCTTTACGGACC
AGGTGGCCCACACACGGCCTTAAAAGATATAGCAAACAAATATAGCGAAAAAACAGGCGTTAAAGTAAATGTAAATTTTG
GCCCTCAAGCGACTTGGTTTGAAAAGGCTAAAAAAGATGCAGATATTTTATTTGGCGCTTCAGATCAATCGGCTTTAGCT
ATAGCGAGTGATTTTGGAAAAGATTTTAATGTGAGTAAAATCAAGCCTTTATATTTTAGAGAAGCCATCATACTTACTCA
AAAAGGCAATCCTTTAAAAATCAAAGGTTTAAAAGATTTGGCTAATAAAAAAGTAAGAATCGTTGTGCCTGAAGGTGCTG
GAAAGAGCAATACTTCTGGAACTGGAGTTTGGGAAGATATGATAGGTAGAACTCAAGATATAAAAACCATACAAAATTTT
AGAAACAATATCGTGGCCTTTGTTCCAAATAGTGGAAGTGCAAGAAAGCTTTTCGCACAAGATCAAGCCGATGCTTGGAT
CACTTGGATTGACTGGTCAAAAAGCAATCCTGACATAGGAACTGCCGTAGCTATAGAAAAAGATTTGGTTGTTTATAGAA
CTTTTAATGTGATAGCTAAAGAAGGTGCGAGCAAAGAAACACAAGATTTTATTGCTTATTTAAGTTCTAAGGAAGCTAAA
GAAATTTTTAAAAAATACGGCTGGAGAGAATAA

Protein sequence :
MKKIITLFGACALAFSMANADVNLYGPGGPHTALKDIANKYSEKTGVKVNVNFGPQATWFEKAKKDADILFGASDQSALA
IASDFGKDFNVSKIKPLYFREAIILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNF
RNNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVIAKEGASKETQDFIAYLSSKEAK
EIFKKYGWRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 1e-57 54
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 1e-57 54
acfC AAA82706.1 AcfC Virulence VPI Protein 1e-57 54
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 2e-57 54
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 2e-57 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
peb3 YP_002343730.1 major antigenic peptide PEB3 VFG0105 Protein 9e-58 54
peb3 YP_002343730.1 major antigenic peptide PEB3 VFG0839 Protein 7e-58 52