Name : UU180 (UU180) Accession : NP_078012.1 Strain : Ureaplasma parvum ATCC 700970 Genome accession: NC_002162 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG1576 EC number : - Position : 217982 - 218461 bp Length : 480 bp Strand : - Note : - DNA sequence : ATGATGATAAAAATTATAAGTGTAGGGAAATTAAAACAAAAAGCTTTTGTTGATCTAATTAATGATTATTTAAAAAGAAT TAACCATTATTTAAAATGCCAAGAAATTGTTGTTAGCGATGAACCTGAACCAGTTCAAATTTCAAATAAATCCTTAGAAC AAATTAAAAGTAAAGAGGCCTCTAAAATTTTTAAAAATATTAATCAAAATGATTTTGTAATTGCTTTAATTATTGAAAGC AACATTATAAGTAGCGAAACATTAGCTAAAAAAATACAACAATGACTAAACACATTTTCTCATGATATTTGTTTCATTAT TGGTGGATCTAATGGTTTACATGAAAGCATCTATGAGCGTGCTAATTATCATTTATCTATGTCAAAAATGACTTTTGCTC ATGGCTTAGCAAAAGTCATGTTATGTGAACAAATATATAGGGCACTTAGTATTTTAAATAACGGAAAATATCATAAATAA Protein sequence : MMIKIISVGKLKQKAFVDLINDYLKRINHYLKCQEIVVSDEPEPVQISNKSLEQIKSKEASKIFKNINQNDFVIALIIES NIISSETLAKKIQQWLNTFSHDICFIIGGSNGLHESIYERANYHLSMSKMTFAHGLAKVMLCEQIYRALSILNNGKYHK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
SERP2529 | YP_190070.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 1e-31 | 46 |
SE0023 | NP_763578.1 | rRNA large subunit methyltransferase | Not tested | SCCpbp4 | Protein | 1e-31 | 46 |
unnamed | BAB47681.1 | open reading frame X | Not tested | Type-III SCCmec | Protein | 8e-32 | 45 |
unnamed | BAG06184.1 | conserved hypothetical protein orfX | Not tested | Type-VII SCCmec | Protein | 8e-32 | 45 |
unnamed | BAC53844.1 | open reading frame X | Not tested | SRImec-III and SCCmec-III region | Protein | 8e-32 | 45 |
SAR0024 | YP_039501.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 1e-31 | 45 |
orfX | AAL26648.1 | unknown | Not tested | SCCcap1 | Protein | 6e-32 | 45 |
unnamed | BAC57492.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 8e-32 | 45 |
SAV0024 | NP_370548.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 1e-31 | 45 |
unnamed | BAB72121.1 | hypothetical protein | Not tested | Type-IVa SCCmec | Protein | 8e-32 | 45 |
orfX | YP_251938.1 | rRNA large subunit methyltransferase | Not tested | SCCmec | Protein | 8e-32 | 45 |
unnamed | BAB72138.1 | open reading frame X | Not tested | Type-IVb SCCmec | Protein | 8e-32 | 45 |
SSP0026 | YP_300116.1 | rRNA large subunit methyltransferase | Not tested | SCC15305RM | Protein | 5e-32 | 45 |
unnamed | BAC67575.1 | open reading frame X | Not tested | Type-IVc SCCmec | Protein | 8e-32 | 45 |
orfXhom | BAB83497.1 | open reading frame X | Not tested | SCC 12263 | Protein | 9e-28 | 45 |
unnamed | BAA82243.1 | orfX | Not tested | Type-II SCCmec | Protein | 8e-32 | 45 |
orfX | BAA86653.1 | open reading frame X | Not tested | Type-I SCCmec | Protein | 8e-32 | 45 |
unnamed | BAD24821.1 | conserved hypothetical protein orfX | Not tested | Type-V SCCmec | Protein | 8e-32 | 45 |
unnamed | ACL99851.1 | hypothetical protein | Not tested | Type-V SCCmec | Protein | 1e-22 | 44 |