Gene Information

Name : ECp088.2c (ECp088.2c)
Accession : NP_958727.1
Strain :
Genome accession: NC_002128
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 85124 - 85396 bp
Length : 273 bp
Strand : -
Note : -

DNA sequence :
ATGGTCACAGTTAACCTTCATTGCCCCCGTTGCCAGTCCGTTCAGGTTTACCGTCACGGGAAGAACCCAAAAGGACATGA
TCGATTTCGCTGCCGTGACTGTCATCGAGTGTTTCAGCTCACTTACCGTTACGAGGCCCGTAAACCGGGAGTTCAAGACC
AAATCACTGAAATGCCTTTCAACGGTGCCGGAGTTCGCGATACTGCCCGTACGCTGAAAATCGGCATTAATACTGTCATT
CGGACTTTAAAAAACGCTCGCCACGAAGAATAA

Protein sequence :
MVTVNLHCPRCQSVQVYRHGKNPKGHDRFRCRDCHRVFQLTYRYEARKPGVQDQITEMPFNGAGVRDTARTLKIGINTVI
RTLKNARHEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 2e-16 62
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 2e-16 62
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 1e-16 42
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 1e-16 42
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 2e-16 42
insA AEZ06026.1 InsA Not tested AbaR24 Protein 1e-16 42
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 2e-16 42
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 2e-16 42
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 7e-17 41
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 7e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECp088.2c NP_958727.1 hypothetical protein VFG1690 Protein 7e-17 62