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Name : etpD (pO157p03) Accession : NP_052609.1 Strain : Genome accession: NC_002128 Putative virulence/resistance : Virulence Product : EtpD Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 3675 - 5432 bp Length : 1758 bp Strand : + Note : type II secretion pathway related protein DNA sequence : ATGCTGAACGAGGAACAATATTATCAGTTCTTTCTCAGTGTGCTGGACGTTTATGGTTTTGCTGTGGTCGATATGCACAA CGGTATACTGAAAGTAGTGCGCTCAAAAGATGCCAAAACGTCGGCGGTGCCGGTAGCTAGTGATGTCAGTCCCGGGACTG GTGATGAGGTTGTTACCCGGGTGGTCCCCGTAAGTAACGTGGCAGCCAGAGATCTGGCGCCTTTGCTGCGTCAGCTCAAT GATAATGCTGGCGCAGGAAGCGTGGTGCATTATGAACCTTCTAATGTTTTGTTGATGACCGGACGTGCTGCAGTGATGAA ACGGTTGATGGAGATTGTTGAACGTGTGGATAAGGTGGGTAATCGCAGCGTTGCCACGGTCCCGCTCACCTACGCGTCCG CAACAGACGTAGCCAGACTTGTTACGGAACTGACTAAAGAAACAGATAAGACAGCTATACCTGCTTGGATGACGGCGAAA CTGGTTGCAGACGAGAGGACAAACTCAGTGCTCGTCAGCGGAGAGCCAATCTCCCAACAGCGTATCATCTCCATAATTAA GCAACTGGATCGTCAGGAGGATGTTCAGGGTAATACTAAGGTGATTTACCTGAAATATGCGAAGGCGAAGGATTTAGTGG AAGTCCTGACAGGTATCAGCAGCAGTATTGAAAACGACTCTAAAAAGAGTCCGTCAACGGAAGCCTTGCGCAAAGGAGTG ACGATTAAATCCCACGAACAAACCAATGCCCTGATCCTGACGGGGGCCCCTGACGTCATCCGCGACCTTGAAAATGTGAT TTCGCAGTTGGATATTCGTCGTCCTCAGGTCCTGGTGGAGGCCATCATTGCTGAAATACAGGATGCTGACGGGCTGAACC TTGGGATCCAGTGGGTGAATAAACATGCCGGTGTGGCGCAGTTCACCAGTACCGGTTTACCTATTACCACGATGGTTCAG ACTCGTCAGAACGAAATCTTAGACAGCGATCAGAGCAATGCCCTGAGCATGTTTAACGGAATTGCAGCGGGGTTTTATCA GGGAAACTGGGCGATGCTGTTGACGGCGCTCTCCACAAGTAGCAAGAATGATATCTTGGCGACCCCCAGTATTGTCACGC TGGACAATATGGAGGCCACTTTCAATGTTGGTCAGGAGGTCCCGGTACTTTCGGGCTCACAGACAACCTCTGGGGACAAT ATTTTTAACACGGTCGAGCGCAAAACGGTGGGGATCAAACTCAGGGTAAAACCCCAGATCAACGAGGGTGATTCCGTGTT ACTGGAGATAGAACAGGAGGTGTCCGGTGTGGCGGACACTGCAGTAGCCACCACTACTGACTTGGGAGCAACCTTCAACA CCCGAACAGTGACCAATGCCATGCTGGTCGGGAATGGCGAAACGGTGGTGGTCGGAGGATTACTGGATAAGTCGATCAGG GGGAGTGAGAGTAAAGTGCCACTGCTGGGGGATATCCCGGTACTGGGGCATCTTTTTCGCGCAAAAAGCGAACAGACAGC TAAGCGTAATCTGATGCTGTTCATTCGGCCAACTATTATTCGTGAGCGCGACGGATTTCGTCATGCTTCGGCCGAAAAAT ACCAGTCGTTTAATCAGGAACAGGTGCAGTCGCGTGGCAAAGAAACAACGGCGCTGACGCTGAATGAGGAACAGCTCAGG CTGTCCCCCGATCAAGACGATACGGCTTTCCGGAAGGTGAAAGCGGCGATTGCTGCGTTTTATGCGCAGGAGATGTAA Protein sequence : MLNEEQYYQFFLSVLDVYGFAVVDMHNGILKVVRSKDAKTSAVPVASDVSPGTGDEVVTRVVPVSNVAARDLAPLLRQLN DNAGAGSVVHYEPSNVLLMTGRAAVMKRLMEIVERVDKVGNRSVATVPLTYASATDVARLVTELTKETDKTAIPAWMTAK LVADERTNSVLVSGEPISQQRIISIIKQLDRQEDVQGNTKVIYLKYAKAKDLVEVLTGISSSIENDSKKSPSTEALRKGV TIKSHEQTNALILTGAPDVIRDLENVISQLDIRRPQVLVEAIIAEIQDADGLNLGIQWVNKHAGVAQFTSTGLPITTMVQ TRQNEILDSDQSNALSMFNGIAAGFYQGNWAMLLTALSTSSKNDILATPSIVTLDNMEATFNVGQEVPVLSGSQTTSGDN IFNTVERKTVGIKLRVKPQINEGDSVLLEIEQEVSGVADTAVATTTDLGATFNTRTVTNAMLVGNGETVVVGGLLDKSIR GSESKVPLLGDIPVLGHLFRAKSEQTAKRNLMLFIRPTIIRERDGFRHASAEKYQSFNQEQVQSRGKETTALTLNEEQLR LSPDQDDTAFRKVKAAIAAFYAQEM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-114 | 45 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-112 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| etpD | NP_052609.1 | EtpD | VFG2047 | Protein | 2e-111 | 45 |
