Gene Information

Name : hlyC (pO157p17)
Accession : NP_052623.1
Strain :
Genome accession: NC_002128
Putative virulence/resistance : Virulence
Product : hemolysin C
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2994
EC number : -
Position : 16119 - 16610 bp
Length : 492 bp
Strand : +
Note : -

DNA sequence : 
ATGGGGAAGGTTGCATGGCTATGGGCCTGTTCTCCTCTGCATAAAAAATGGCCATTATCTGTTTTTGCTATTAATGTCAT
ACCTGCTATTCAGACAAATCAATTTGCTCTCTTAATAAAGGATGAGCTTCCTGTAGCTTTTTGTAGCTGGGCCAGTTTAG
ATCTGGAATGTGAGGTAAAATATATAAATGATGTAACATCTTTGTATGCAAAAGACTGGATGTCGGGAGAAAGAAAGTGG
TTTATTGACTGGATAGCTCCATTTGGACACAACATGGAGTTATATAAATACATGAGGAAAAAGTATCCTTATGAGTTATT
CAGAGCAATAAGGTTAGATGAGAGCAGTAAAACAGGAAAAATAGCTGAATTTCATGGAGGGGGGATAGATAAAAAACTGG
CATCAAAAATATTCAGGCAATACCATCATGAACTTATGTCTGAAGTAAAAAACAGACAAGATTTTAATTTTAATATTGAG
AAAGAAAACTAA

Protein sequence : 
MGKVAWLWACSPLHKKWPLSVFAINVIPAIQTNQFALLIKDELPVAFCSWASLDLECEVKYINDVTSLYAKDWMSGERKW
FIDWIAPFGHNMELYKYMRKKYPYELFRAIRLDESSKTGKIAEFHGGGIDKKLASKIFRQYHHELMSEVKNRQDFNFNIE
KEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyC CAD42040.1 HlyC protein Virulence PAI II 536 Protein 3e-55 70
hlyC CAD33758.1 hemolysin C Virulence PAI I 536 Protein 2e-55 70
hlyC NP_755444.1 hemolysin C Virulence PAI I CFT073 Protein 6e-54 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyC NP_052623.1 hemolysin C VFG0842 Protein 6e-74 100
hlyC NP_052623.1 hemolysin C VFG1559 Protein 1e-55 70
hlyC NP_052623.1 hemolysin C VFG1499 Protein 1e-55 70
hlyC NP_052623.1 hemolysin C VFG0905 Protein 2e-54 69