Gene Information

Name : DR_1117 (DR_1117)
Accession : NP_294841.1
Strain :
Genome accession: NC_001263
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit ClpC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1123384 - 1125627 bp
Length : 2244 bp
Strand : -
Note : similar to SP:P31541 percent identity: 71.25; identified by sequence similarity; putative

DNA sequence :
ATGACCAACCGATTCGATGACCGCGCCCGGCTCGTCTTTCACTACGCCCGTGAAGAGGGCAACCGTCTGGGCCACGCGAT
GGTCGGGCCCGAACATCTGCTGCTGGGCCTGATGCGCGAGGGAGGAAGCGCCGCGCAGATTCTGGGCGAGTTCGGGGCCA
CCCTCGACTCGCTGCGCCGCAAGGTCGAGGACATCATTGGCCGCGGCGAGGGCAGCCGCCTCAACGACGCCCCGAGCATC
ACGCCCCGCGCCCGCCGGGTGATGGAGCTTTCGGGCGCCGAGGCCCGCGCCCTGGGCTCGCAGACCACCTCCACCCAGCA
CATCCTGCTCGGCATTATTCGGGAGGGCGACGGGGTGGCGTTCCGCATCCTGCAAGACCTCACCAAGGATGTCGAGACGA
TTCGCTGGCGCATCCTGGCCGAGGACAGCGGTGAGGGCGGCAAGGCGGCCAAGCCGGTGCCCACGCCTTTTCTCGACGAG
TACGGGCGCGACCTGACGAAGTGGGCCCGCGAGGGCAAACTCGACCCGGTGATTGGCCGCTCGGAGGAAATCCGGCGCGT
GACCCAGATCCTGACCCGGCGCACCAAGAACAACCCGGTGCTGATCGGCGACCCCGGCGTGGGCAAGACCGCAATTGTGG
AAGGACTGGCACTCGCCATTCACGAGCAGCGCACGCCGCCCTCGCTGCATGGGGTGCGGCTCATCAGCCTGGACCTCAGC
GGCGTGGTCGCGGGCACCAAGTACCGCGGTGAATTCGAAGAGCGCCTGCGCCAGATTATCGAGGAACTGCGGACCGCTAA
AGTCATGGCCTTCATCGACGAGCTGCACACCCTGGTCGGGGCGGGCGGCGCGGAAGGCACCCTCGACGCAGCCAACATCC
TCAAGCCGGCGCTCTCACGCGGCGAAATTCAGGTGATCGGCGCGACTACTACCGGCGAATATCACCGCTACATCGAGAAG
GACGCCGCCCTCGAACGGCGCTTCCAGCCGGTGATCGTGCTGGAACCCAGCCCCGCCGAGACACTGCAAATCCTGCGTGG
CCTCAAGCCCAAGTACGAGGAGCACCACGGCGTGCAGATTCCCGACTCGGCGCTCGAACTCGCCGTGCGCATCGGCGAGC
GCAGCCTGCCGGGGCGCAACTTCCCCGACAAGGCCATCGACCTGATCGACGAAGCTGCCAGCCGGGTGCGCCTGAACATG
AGCGTGGGCCTGCCGGTCGCCGAAAACGAAAGCGGCGAGCCGATGGTCACCCGCGAAGACATGGAAAGCGTCATCAACTC
GATGGGCGGTATCTACTCCGAGGAAACCGGGGCGGCGCTCATCGACCTCGAAGAGCAGCTCAACGACCAGGTGTACGGCC
AGCCCGACGCGGTCAAGGCCCTGACGAGCGCCATGCGCCGCGCCCGGGTAGGCCTCGGCGGACGCACCCGCGTGTCGGCC
TCCTTCCTGTTCGTGGGGCCGAGCGGCGTAGGCAAGACGCACCTCGCCAAGGCGCTCGCCCGCACGCTGTTCGGCAGTGA
ACGGGCACTGATCCGGGTGGACATGTCCGAGTTTCAGGAAGGGCACTCCATCTCCAAGCTCATCGGGTCGCCTCCCGGCT
ACGTGGGCTTCGAGCAGGGCGGACGCCTGACCGAAGCCGTGCGCCGCCAGCCCTTCAGCGTGATTTTGCTCGACGAAATC
GAGAAGGCGCACCCCGACATCTACAACACCTTCTTGCAGGTGCTCGACGACGGGCGCCTTACCGATGGGCAGGGCCGCAC
GGTGGATTTCCGCCGCACCGTCATCATCATGACGAGCAACACCGGCTTCAACGTCAATCCGACGGTGGGCTTCTCCCCCG
TCACGCCCGACTCCAACGCGCCGCTGCGCAACATCTTTACCCCCGAGTTTCTGGACCGCCTCGACGACGTGATTCGCTTC
AAGTCGCTCGGCGAGGACGAACTGGTGCGGGTGGCGCAGCAACTGCTCGGCGAAATGCGCGAGGAACTCGCCAGCCGCGA
GCTGAACGTGACCTTCGACCCGGCGATTGCCGCCTGGGTGGTCGGCAAGCTCAAGGCCCGCTCGCCCAAGCACGCGGTGG
GCAGCTCGCGGCAGCTGCGTACTCTGCTGCGTGAGGAACTCGAAGACCCGCTGGCGCTCTACCTCATCGGCTCCGACGCC
CGTGACTTACGGGTGGTGCTCGGCGAAAACAGCATCGACTTCGAGCAGGTCGAGCGCTCGGCGCCGCCGCAGATTCTGGC
CTGA

Protein sequence :
MTNRFDDRARLVFHYAREEGNRLGHAMVGPEHLLLGLMREGGSAAQILGEFGATLDSLRRKVEDIIGRGEGSRLNDAPSI
TPRARRVMELSGAEARALGSQTTSTQHILLGIIREGDGVAFRILQDLTKDVETIRWRILAEDSGEGGKAAKPVPTPFLDE
YGRDLTKWAREGKLDPVIGRSEEIRRVTQILTRRTKNNPVLIGDPGVGKTAIVEGLALAIHEQRTPPSLHGVRLISLDLS
GVVAGTKYRGEFEERLRQIIEELRTAKVMAFIDELHTLVGAGGAEGTLDAANILKPALSRGEIQVIGATTTGEYHRYIEK
DAALERRFQPVIVLEPSPAETLQILRGLKPKYEEHHGVQIPDSALELAVRIGERSLPGRNFPDKAIDLIDEAASRVRLNM
SVGLPVAENESGEPMVTREDMESVINSMGGIYSEETGAALIDLEEQLNDQVYGQPDAVKALTSAMRRARVGLGGRTRVSA
SFLFVGPSGVGKTHLAKALARTLFGSERALIRVDMSEFQEGHSISKLIGSPPGYVGFEQGGRLTEAVRRQPFSVILLDEI
EKAHPDIYNTFLQVLDDGRLTDGQGRTVDFRRTVIIMTSNTGFNVNPTVGFSPVTPDSNAPLRNIFTPEFLDRLDDVIRF
KSLGEDELVRVAQQLLGEMREELASRELNVTFDPAIAAWVVGKLKARSPKHAVGSSRQLRTLLREELEDPLALYLIGSDA
RDLRVVLGENSIDFEQVERSAPPQILA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-136 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DR_1117 NP_294841.1 ATP-dependent Clp protease, ATP-binding subunit ClpC VFG0080 Protein 3e-121 48