Gene Information

Name : yfmF (BSU07490)
Accession : NP_388630.1
Strain : Bacillus subtilis 168
Genome accession: NC_000964
Putative virulence/resistance : Virulence
Product : Fe(3+)-citrate import ATP-binding protein YfmF
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 822903 - 823703 bp
Length : 801 bp
Strand : -
Note : Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 16672620; Product type t: transporter

DNA sequence : 
ATGGGAAAACTGGCTGCAGACCAGCTCACTCTTTCATATGACAGTACAGTGATTATTGACGGAGTCGACTTAAAGATAGA
AGAAGGAAAAATCACTGCGCTCATCGGCGCTAATGGCTGCGGTAAATCAACAATCCTCAAATCGCTCGCCAGGCTGATGG
CCCCAAAAAGCGGTACAGTGCTACTAGAAGGAAAAGACATCCACCGCCAGCCATCAAAAGAAGTCGCAAAAAAACTGGCC
ATTCTTCCACAATCTCCTCAGGCTCCTGAAGGATTGACGGTAGAGGAATTATGCTATTTTGGCAGACATCCTCACAAAAA
GCTGTTATCCAAGCATACCCAAGAGGATCATGACATGGTAGAGTGGGCGCTGGAAGCAACGGGCATGATTGAACTGAAGG
ATCGGACACTTGATGCCCTCTCAGGCGGCCAAAGACAAAGAGCCTGGATTTCCATGGCACTTGCGCAAGGCACTGATTTG
CTTTTGCTTGATGAGCCGACCACGTATTTAGACATCTCACATCAGATTGAAGTGCTTGAACTGCTGAAAAAGCTGAACCG
CGACCATGGCCGCACCGTTGTCATGGTGCTCCATGATTTAAACCAAGCCGCTCAATATGCTGACTATCTGATCAGTGTGC
TGGACGGAAAAATATACAACGCCGGAACACCGGAAGATGTGTTCACCCAGCCATTTTTCCGTGAAGTCTTCGGCTTGGAA
TGCTGCATCATGAGAAGCCCGATCGACCAGAAGCCAATGTGCCTGCCGACGGGACTGTGCCCGAAATTACGGGCGAAATG
A

Protein sequence : 
MGKLAADQLTLSYDSTVIIDGVDLKIEEGKITALIGANGCGKSTILKSLARLMAPKSGTVLLEGKDIHRQPSKEVAKKLA
ILPQSPQAPEGLTVEELCYFGRHPHKKLLSKHTQEDHDMVEWALEATGMIELKDRTLDALSGGQRQRAWISMALAQGTDL
LLLDEPTTYLDISHQIEVLELLKKLNRDHGRTVVMVLHDLNQAAQYADYLISVLDGKIYNAGTPEDVFTQPFFREVFGLE
CCIMRSPIDQKPMCLPTGLCPKLRAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-54 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-60 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-50 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-50 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-50 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-50 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-56 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-56 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmF NP_388630.1 Fe(3+)-citrate import ATP-binding protein YfmF BAC0164 Protein 3e-54 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmF NP_388630.1 Fe(3+)-citrate import ATP-binding protein YfmF VFG1042 Protein 3e-54 48
yfmF NP_388630.1 Fe(3+)-citrate import ATP-binding protein YfmF VFG0925 Protein 2e-59 48