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Name : ydfA (BSU05340) Accession : NP_388415.1 Strain : Bacillus subtilis 168 Genome accession: NC_000964 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein YdfA Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 579889 - 581196 bp Length : 1308 bp Strand : + Note : Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId: 15849754, 16850406; Product type pt: transporter DNA sequence : TTGACATCAATGATTTTGGCAGTATTCATCTTTTTATTAACTCTAGTATTGGTCATATGGCAGCCGAAAAATTTATCTAT AGGGTGGTCAGCCTGTGGAGGCGCAGTTTTAGCTCTAATAGCAGGTGTTGTCAATTTTCATGATGTGTTAACTGTGACAG GGATTGTTTGGAATGCGACCTTGGCTTTTGTGGCCATCATACTGATATCGTTAATTCTTGATAATATCGGTTTCTTTGAA TGGGCAGCGCTTCATATGGCTAAGGCTGCAAAAGGATACGGTGTGCGGATGTTCGTTTATGTATCTCTATTAGGAGCTAT CGTCGCCGCGTTATTTGCAAATGACGGTGCAGCTCTTATATTGACACCAATCGTATTAGCGATGGTCAGAGCATTACATT TTAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGCGGATTTATTGCGGATACCACTTCGCTTCCTTTTGTAGTAAGC AATTTGGTCAACATTGTTTCAGCGGACTATTTTCATATTACGTTTATTGATTATGCATCCAGAATGGTTGTCCCGTACCT GTTTTCGCTGCTGGCGAGCATCATTGTACTTTACCTTTTCTTTAGAAAAAGCATACCAAAACGCTATGATCTGACTGAGG TTAAAAAACCTGTTGAAGCAATTAAAGATCAAAACATGTTCAGACTGTCATGGTATATCTTAGGGCTGCTGTTAATTGGA TATTTTGCAAGTGAATTTTTTTCTATCCCTGTATCAGTGGTAGCGGGCAGCATTGCAATCATTTTCTTAATCGCTGCGCA AAAGAGTCCGGCCGTCCATACAAAGAAAGTGGTGAAAGAGGCGCCATGGGCTATCGTATTCTTTTCAATTGGCATGTACG TTGTTGTGTATGGTGTCCGAAATGCCGGATTAACGGATGTCCTTTCAGATGTGATTCAAGCCGCAGCTGATCAAGGATTG TTTGCTGGGACAATTGGAATGGGCTTTATTGCGGCGATTCTTTCTTCCATTATGAATAACTTGCCGACTGTTATGATTGA CGCATTGGCCATTGCCGGTACAGATACACATGGGATGATGAGAGAAGCGCTTATTTATGCAAATGTGATCGGTTCAGATT TAGGGCCTAAAATAACACCGATTGGTTCCTTAGCGACATTATTATGGCTTCATGTTCTTTCGCACAAAGGTATGAAGATT TCCTGGGGCACGTATTTTAAAACAGGAATTATCCTCACGATACCCACTTTATTGATCACACTTGTCGGCCTGTATATTTG GCTGCTGATAATCCATTCTTGTTTCTAA Protein sequence : MTSMILAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVLTVTGIVWNATLAFVAIILISLILDNIGFFE WAALHMAKAAKGYGVRMFVYVSLLGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIADTTSLPFVVS NLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLFFRKSIPKRYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIG YFASEFFSIPVSVVAGSIAIIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVRNAGLTDVLSDVIQAAADQGL FAGTIGMGFIAAILSSIMNNLPTVMIDALAIAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKI SWGTYFKTGIILTIPTLLITLVGLYIWLLIIHSCF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 5e-127 | 69 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 2e-123 | 68 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 4e-129 | 67 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 1e-107 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ydfA | NP_388415.1 | arsenical pump membrane protein YdfA | BAC0574 | Protein | 2e-125 | 69 |
| ydfA | NP_388415.1 | arsenical pump membrane protein YdfA | BAC0575 | Protein | 1e-129 | 68 |
| ydfA | NP_388415.1 | arsenical pump membrane protein YdfA | BAC0576 | Protein | 4e-106 | 60 |
| ydfA | NP_388415.1 | arsenical pump membrane protein YdfA | BAC0578 | Protein | 3e-105 | 60 |
| ydfA | NP_388415.1 | arsenical pump membrane protein YdfA | BAC0031 | Protein | 4e-103 | 59 |
| ydfA | NP_388415.1 | arsenical pump membrane protein YdfA | BAC0577 | Protein | 5e-104 | 58 |
