Gene Information

Name : epsC (BSU34350)
Accession : NP_391315.1
Strain : Bacillus subtilis 168
Genome accession: NC_000964
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein EpsC
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : 5.1.3.-
Position : 3526407 - 3528203 bp
Length : 1797 bp
Strand : -
Note : Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId: 15661000; Product type pe : enzyme

DNA sequence :
ATGATTATTGCGCTGGATACTTACCTCGTTTTAAATTCAGTTATTGCAGGATATCAATTTTTAAAAGATTCCTATCAATT
TTATGACTCCGGAGCATTACTGCTTACCGCTGTCAGCTTGCTCCTCAGCTATCATGTGTGTGCTTTCCTGTTCAATCAGT
ATAAACAGGTGTGGACATACACCGGGCTTGGCGAGCTGATTGTCCTGCTTAAGGGCATTACGCTTTCAGCCGCTGTGACC
GGCGTCATTCAGTATGCTGTGTATCACACGATGTTCTTCCGTCTGTTAACCGCGTGCTGGGTGCTTCAGCTTTTGTCTAT
TGGAGGGACCCGTATTTTATCCAGAGTATTAAACGAAAGCATCAGGAAAAAACGCTGCGCCTCGTCCCGCGCGCTGATTA
TCGGGGCGGGCTCAGGTGGGACTCTGATGGTCAGGCAGCTGCTTTCGAAAGATGAACCTGATATCATACCTGTCGCTTTT
ATTGATGACGACCAAACGAAGCATAAATTAGAAATTATGGGGCTGCCCGTAATCGGCGGAAAAGAAAGTATCATGCCTGC
GGTGCAAAAGCTCAAAATTAATTATATTATTATTGCCATTCCTTCACTCCGCACCCATGAGCTTCAGGTGTTATATAAAG
AATGTGTGCGAACCGGAGTAAGCATTAAAATTATGCCTCATTTTGATGAAATGCTGCTTGGCACACGAACTGCCGGACAA
ATCAGAGATGTAAAAGCTGAGGACTTGCTCGGCAGAAAGCCGGTAACCCTCGACACTAGCGAAATTTCGAACCGCATCAA
AGGAAAAACAGTTCTCGTCACGGGAGCGGGCGGATCAATCGGCTCGGAAATCTGCCGTCAGATCAGCGCGTTTCAGCCTA
AGGAAATCATTCTGCTCGGCCATGGGGAAAACAGCATTCATTCGATTTATACAGAGCTGAACGGACGATTCGGCAAACAC
ATTGTGTTCCATACGGAAATCGCTGATGTGCAGGACCGCGATAAAATGTTTACCTTGATGAAAAAATACGAGCCGCATGT
TGTCTATCATGCAGCTGCCCATAAGCATGTGCCTTTAATGGAACACAATCCAGAAGAGGCGGTCAAAAACAATATTATCG
GAACAAAAAATGTCGCGGAAGCAGCCGATATGTCGGGAACTGAGACATTCGTGCTGATTTCATCGGACAAAGCGGTGAAC
CCAGCCAACGTAATGGGGGCGACAAAACGATTCGCAGAGATGATTATTATGAATCTTGGGAAAGTCAGCAGAACCAAATT
TGTTGCTGTTCGCTTCGGCAATGTACTCGGGAGCCGCGGCAGCGTCATTCCAATTTTCAAAAAACAGATTGAAAAAGGCG
GCCCGGTGACAGTAACACATCCGGCAATGACCCGCTATTTCATGACGATTCCCGAGGCATCAAGGCTTGTGATTCAGGCT
GGGGCACTGGCGAAAGGGCGTCAAATTTTCGTTCTCGATATGGGAGAGCCCGTAAAGATTGTGGATCTTGCCAAAAACCT
CATTCATTTGTCCGGCTACACGACTGAGCAGGTTCCAATCGAATTCACAGGCATTCGTCCGGGCGAAAAAATGTATGAAG
AATTGCTGAACAAAAATGAAGTCCATGCTGAACAAATCTTTCCAAAAATTCACATCGGTAAAGCGGTGGACGGCGATTGG
CCGGTGCTGATGCGCTTTATCGAGGATTTTCATGAGCTGCCGGAAGCCGACCTGAGAGCGAGGCTGTTTGCGGCAATCAA
TACATCAGAAGAAATGACGGCTGCCAGCGTTCATTAG

Protein sequence :
MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGALLLTAVSLLLSYHVCAFLFNQYKQVWTYTGLGELIVLLKGITLSAAVT
GVIQYAVYHTMFFRLLTACWVLQLLSIGGTRILSRVLNESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAF
IDDDQTKHKLEIMGLPVIGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRTAGQ
IRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEIILLGHGENSIHSIYTELNGRFGKH
IVFHTEIADVQDRDKMFTLMKKYEPHVVYHAAAHKHVPLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVN
PANVMGATKRFAEMIIMNLGKVSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRLVIQA
GALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQVPIEFTGIRPGEKMYEELLNKNEVHAEQIFPKIHIGKAVDGDW
PVLMRFIEDFHELPEADLRARLFAAINTSEEMTAASVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-120 53
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 2e-118 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epsC NP_391315.1 polysaccharide biosynthesis protein EpsC VFG1300 Protein 6e-121 53