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Name : amt (Rv2920c) Accession : NP_217436.1 Strain : Mycobacterium tuberculosis H37Rv Genome accession: NC_000962 Putative virulence/resistance : Unknown Product : Probable ammonium-transport integral membrane protein Amt Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 3231073 - 3232506 bp Length : 1434 bp Strand : - Note : Rv2920c, (MTCY338.09c), len: 477 aa. Probable amt,ammonium-transport integral membrane protein (ala-, gly-,leu-, val-rich protein), highly similar to others e.g. Q9ZBP6|SC7A1.27 ammonium transporter from Streptomyces coelicolor (448 aa), FASTA scores: opt DNA sequence : GTGGACCAATTCCCCATCATGGGCGTTCCGGATGGCGGCGACACCGCCTGGATGCTGGTGAGTTCCGCGCTCGTGCTGTT GATGACGCCGGGTCTGGCATTTTTCTACGGCGGCATGGTGCGTTCCAAGAGCGTCCTGAACATGATCATGATGAGCATCA GCGCGATGGGTGTCGTGACGGTGCTCTGGGCGCTTTACGGCTACTCGATTGCGTTCGGTGATGACGTTGGCAACATCGCC GGCAACCCGAGCCAATACTGGGGTCTCAAAGGTCTCATCGGCGTCAATGCTGTTGCTGCCGATCCGAGCACGCAGACCGC CGCGGTGAATATTCCGCTGGCGGGTACCCTGCCGGCGACCGTGTTTGTGGCATTCCAGCTGATGTTCGCGATCATCACGG TTGCGCTGATCTCCGGGGCGGTGGCCGACCGGTTGAAGTTCGGCGCCTGGCTGTTGTTCGCCGGTTTGTGGGCGACGTTC GTCTATTTCCCGGTCGCACACTGGGTCTTCGCATTTGACGGTTTCGCCGCTGAGCACGGCGGCTGGATCGCCAACAAGCT GCACGCCATCGACTTCGCCGGCGGCACCGCGGTTCATATCAACGCCGGTGTGGCGGCCTTGATGCTGGCGATCGTGCTGG GCAAAAGACGCGGTTGGCCGGCGACGCTGTTTCGACCGCACAATCTGCCGTTTGTGATGCTCGGGGCCGCCCTGCTGTGG TTCGGCTGGTACGGGTTCAACGCAGGATCGGCGACGACCGCCAACGGTGTTGCCGGGGCGACGTTTGTCACCACCACGAT TGCGACGGCCGCGGCCATGCTTGGCTGGCTGCTCACGGAGCGCGTCCGAGATGGCAAGGCTACGACGCTGGGCGCGGCGT CGGGCATCGTCGCCGGACTGGTCGCCATCACGCCGTCCTGCTCGTCGGTTAATGTCCTGGGTGCCTTGGCGGTAGGCGTG TCGGCCGGGGTGCTGTGCGCGCTGGCGGTGGGGCTGAAATTCAAACTGGGCTTCGATGATTCGCTCGACGTGGTCGGGGT GCACCTGGTTGGTGGTCTGGTGGGCACACTGCTGGTGGGTCTGCTGGCAGCTCCGGAGGCTCCGGCAATTAATGGTGTGG CCGGGGTATCGAAGGGGTTGTTTTACGGCGGAGGCTTCGCCCAGCTGGAACGACAGGCGCTCGGTGCCTGCAGTGTTCTC GTCTACTCTGGAATCATCACCCTGATCTTGGCATTGATCCTGAAATTCACCATCGGGCTCAGGCTTGACGCGGAGCAAGA GAGCACCGGCATCGACGAGGCTGAGCACGCGGAAAGCGGCTACGATTTCGCCGTCGCCAGCGGCTCGGTTCTCCCCCCGC GGGTCACCGTGGAGGATAGCCGCAACGGCATTCAGGAGCGTATAGGCCAGAAAGTGGAGGCGGAGCCGAAATGA Protein sequence : MDQFPIMGVPDGGDTAWMLVSSALVLLMTPGLAFFYGGMVRSKSVLNMIMMSISAMGVVTVLWALYGYSIAFGDDVGNIA GNPSQYWGLKGLIGVNAVAADPSTQTAAVNIPLAGTLPATVFVAFQLMFAIITVALISGAVADRLKFGAWLLFAGLWATF VYFPVAHWVFAFDGFAAEHGGWIANKLHAIDFAGGTAVHINAGVAALMLAIVLGKRRGWPATLFRPHNLPFVMLGAALLW FGWYGFNAGSATTANGVAGATFVTTTIATAAAMLGWLLTERVRDGKATTLGAASGIVAGLVAITPSCSSVNVLGALAVGV SAGVLCALAVGLKFKLGFDDSLDVVGVHLVGGLVGTLLVGLLAAPEAPAINGVAGVSKGLFYGGGFAQLERQALGACSVL VYSGIITLILALILKFTIGLRLDAEQESTGIDEAEHAESGYDFAVASGSVLPPRVTVEDSRNGIQERIGQKVEAEPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 4e-55 | 43 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 4e-55 | 43 |
