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Name : ribC (Rv1412) Accession : NP_215928.1 Strain : Mycobacterium tuberculosis H37Rv Genome accession: NC_000962 Putative virulence/resistance : Unknown Product : Probable riboflavin synthase alpha chain RibC (RibE) Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0307 EC number : - Position : 1588567 - 1589172 bp Length : 606 bp Strand : + Note : Rv1412, (MTCY21B4.29), len: 201 aa. Probable ribC (ribE), Riboflavin synthase alpha chain, strong similarity to e.g. RISA_ACTPL|P50854 (215 aa), FASTA scores: opt: 586,E(): 1.8e-33, (50.8% identity in 197 aa overlap). Contains 2 x PS00693 Riboflavin synth DNA sequence : ATGTTCACCGGAATTGTTGAGGAACGCGGAGAAGTGACCGGGCGTGAGGCCCTGGTCGATGCGGCGCGGCTGACCATCCG CGGTCCGATGGTTACCGCCGACGCCGGCCACGGCGACTCGATCGCTGTCAACGGCGTGTGTCTGACGGTCGTCGATGTAT TGCCCGACGGCCAATTCACCGCCGACGTGATGGCCGAGACACTGAACCGGTCCAACCTGGGTGAGCTACGGCCCGGCAGC CGGGTGAACCTGGAACGCGCCGCGGCGCTGGGCAGCCGGCTCGGCGGGCACATCGTGCAGGGACATGTGGACGCCACCGG TGAAATCGTGGCGCGTTGTCCCTCCGAGCACTGGGAAGTGGTGCGCATCGAGATGCCGGCTTCGGTGGCTCGCTATGTCG TCGAAAAGGGCTCGATCACCGTCGACGGGATTTCTCTGACGGTCTCCGGGCTCGGCGCCGAACAGCGGGACTGGTTTGAG GTCTCGCTGATCCCGACGACCCGGGAGCTGACCACGCTGGGGTCCGCTGCGGTGGGAACCCGGGTGAACCTCGAAGTCGA CGTAGTCGCAAAGTATGTTGAGCGGTTAATGCGGAGCGCCGGCTGA Protein sequence : MFTGIVEERGEVTGREALVDAARLTIRGPMVTADAGHGDSIAVNGVCLTVVDVLPDGQFTADVMAETLNRSNLGELRPGS RVNLERAAALGSRLGGHIVQGHVDATGEIVARCPSEHWEVVRIEMPASVARYVVEKGSITVDGISLTVSGLGAEQRDWFE VSLIPTTRELTTLGSAAVGTRVNLEVDVVAKYVERLMRSAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00291 | YP_008207756.1 | Riboflavin synthase alpha chain | Not tested | AbaR25 | Protein | 5e-32 | 46 |
| BJAB0868_00295 | YP_008211621.1 | Riboflavin synthase alpha chain | Not tested | AbaR26 | Protein | 5e-32 | 46 |
