|
Name : kdpB (Rv1030) Accession : NP_215546.1 Strain : Mycobacterium tuberculosis H37Rv Genome accession: NC_000962 Putative virulence/resistance : Unknown Product : Probable potassium-transporting P-type ATPase B chain KdpB (potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (potassium binding and translocating subunit B) Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 1153724 - 1155853 bp Length : 2130 bp Strand : + Note : Rv1030, (MTCY10G2.19c), len: 709 aa. Probable kdpB,potassium-transporting P-type ATPase B chain (transmembrane protein), similar to others e.g. ATKB_ECOLI|P03960 potassium-transporting ATPase B chain from Escherichia coli strain K12 (682 aa), FASTA scores DNA sequence : GTGATGATCGCACGCATGGAGACCTCCGCAACCGCCGCGGCAGCGACGTCGGCACCCCGGCTCCGGCTGGCCAAGCGCTC GCTGTTCGATCCGATGATTGTGCGCTCGGCGCTGCCCCAGAGCCTGCGCAAGCTGGCTCCGCGGGTACAGGCCCGTAACC CGGTCATGTTGGTCGTGCTGGTCGGTGCCGTGATCACCACACTGGCGTTCCTGCGCGACCTCGCATCCTCGACAGCCCAA GAGAACGTCTTCAACGGTCTGGTCGCCGCGTTCCTCTGGTTCACCGTCCTGTTTGCCAACTTTGCCGAGGCCATGGCCGA AGGACGCGGCAAGGCTCAGGCGGCGGCGCTGCGCAAAGTCCGGTCCGAAACGATGGCCAACCGGCGCACGGCTGCGGGCA ACATCGAATCGGTCCCTTCGTCGCGGCTGGACCTCGACGACGTGGTGGAGGTTTCGGCTGGCGAAACGATCCCGTCGGAC GGCGAGATCATCGAAGGCATTGCCTCCGTCGACGAGTCTGCGATCACCGGCGAATCGGCACCGGTGATCCGCGAGTCGGG CGGCGACCGTTCCGCGGTGACGGGTGGCACCGTGGTGCTGTCGGATCGGATCGTCGTGCGGATCACCGCCAAGCAGGGAC AAACATTCATCGACCGGATGATCGCGCTGGTGGAGGGCGCCGCACGGCAGCAGACACCGAACGAGATCGCGCTGAACATC CTGCTGGCTGGGCTGACGATCATCTTTTTGCTCGCGGTGGTGACGCTGCAGCCGTTCGCCATCTATTCCGGCGGGGGACA GCGGGTGGTCGTGCTGGTGGCGTTGCTGGTGTGTCTCATTCCGACCACGATCGGTGCGCTGCTGTCCGCGATCGGCATCG CGGGGATGGACCGGCTGGTGCAACACAACGTGCTCGCCACATCTGGGCGGGCGGTGGAGGCGGCCGGCGACGTGAACACG CTGCTGCTGGACAAGACCGGCACCATCACCCTCGGTAACCGGCAGGCCACCGAGTTCGTGCCGATCAACGGTGTGAGTGC CGAGGCGGTCGCCGACGCCGCCCAGCTGTCGAGCTTGGCCGACGAAACTCCGGAGGGCCGCTCGATCGTCGTGCTGGCGA AGGACGAGTTCGGGCTGCGCGCCCGCGACGAGGGCGTGATGTCACACGCCAGGTTCGTGCCGTTCACCGCCGAAACCCGG ATGTCCGGGGTCGATCTCGCCGAGGTTAGCGGCATCCGTCGGATCCGCAAGGGTGCCGCGGCTGCGGTGATGAAGTGGGT TCGCGATCACGGTGGCCACCCCACCGAGGAGGTGGGTGCCATTGTCGACGGCATCAGCTCCGGCGGGGGGACACCCCTAG TCGTTGCGGAATGGACCGATAACAGCAGCGCGCGGGCCATCGGCGTCGTCCATCTGAAGGACATCGTCAAGGTGGGCATA CGGGAACGCTTCGACGAAATGCGCCGAATGAGCATCCGCACCGTGATGATCACCGGTGACAACCCGGCGACCGCCAAGGC GATTGCACAGGAGGCCGGCGTCGACGATTTCTTGGCCGAGGCCACGCCCGAGGACAAGCTTGCGCTCATCAAGCGCGAAC AGCAGGGCGGTCGGCTGGTCGCCATGACGGGTGACGGGACCAATGACGCACCCGCGCTCGCGCAAGCCGATGTCGGGGTG GCGATGAATACCGGCACCCAGGCGGCCCGGGAAGCCGGCAACATGGTCGATCTCGACTCCGACCCCACCAAGCTCATCGA GGTCGTGGAGATCGGCAAGCAGCTGCTGATCACGCGGGGCGCGCTGACGACGTTTTCGATCGCCAACGACGTCGCGAAGT ACTTCGCCATCATCCCTGCCATGTTCGTCGGCCTGTATCCGGTGCTCGACAAGCTGAACGTCATGGCGCTGCACTCACCA AGGTCGGCGATTCTGTCGGCGGTCATCTTCAATGCGCTGGTGATCGTCGCCTTGATCCCATTGGCGTTGCGGGGCGTGCG GTTTAGGGCGGAAAGCGCGTCGGCGATGCTGCGGCGCAACCTGCTGATCTATGGGCTGGGCGGTCTCGTCGTCCCGTTTA TCGGCATTAAACTGGTCGATCTCGTCATCGTCGCCCTCGGGGTGTCCTGA Protein sequence : MMIARMETSATAAAATSAPRLRLAKRSLFDPMIVRSALPQSLRKLAPRVQARNPVMLVVLVGAVITTLAFLRDLASSTAQ ENVFNGLVAAFLWFTVLFANFAEAMAEGRGKAQAAALRKVRSETMANRRTAAGNIESVPSSRLDLDDVVEVSAGETIPSD GEIIEGIASVDESAITGESAPVIRESGGDRSAVTGGTVVLSDRIVVRITAKQGQTFIDRMIALVEGAARQQTPNEIALNI LLAGLTIIFLLAVVTLQPFAIYSGGGQRVVVLVALLVCLIPTTIGALLSAIGIAGMDRLVQHNVLATSGRAVEAAGDVNT LLLDKTGTITLGNRQATEFVPINGVSAEAVADAAQLSSLADETPEGRSIVVLAKDEFGLRARDEGVMSHARFVPFTAETR MSGVDLAEVSGIRRIRKGAAAAVMKWVRDHGGHPTEEVGAIVDGISSGGGTPLVVAEWTDNSSARAIGVVHLKDIVKVGI RERFDEMRRMSIRTVMITGDNPATAKAIAQEAGVDDFLAEATPEDKLALIKREQQGGRLVAMTGDGTNDAPALAQADVGV AMNTGTQAAREAGNMVDLDSDPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFVGLYPVLDKLNVMALHSP RSAILSAVIFNALVIVALIPLALRGVRFRAESASAMLRRNLLIYGLGGLVVPFIGIKLVDLVIVALGVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 4e-173 | 62 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-173 | 62 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-151 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-151 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 3e-151 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-151 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-151 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-151 | 56 |
