Gene Information

Name : PH1350 (PH1350)
Accession : NP_143233.1
Strain : Pyrococcus horikoshii OT3
Genome accession: NC_000961
Putative virulence/resistance : Virulence
Product : ATP-binding transport protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 1216541 - 1217533 bp
Length : 993 bp
Strand : -
Note : -

DNA sequence : 
ATGGTGAGCATTGAACTTAGGGATATAATCAAGAGGTTTGGGGAGTTCGAGTTAAAGGTTAGCTTAAGCGTTAAAGATGG
TGAACTACTCACCCTTTTAGGCCCGAGCGGATGTGGTAAGACAACAACCCTAAGGATAATAGCTGGGCTTGAGAAGCCGG
ATAAAGGTAGGGTGTACTTTGATGGTAGGGATATTACGGATCTTCCCCCTTACGAGAGGAACATCGGATTAGTCTTCCAG
GATTATGCCCTCTTCCCCCATATGACAGTATTCAAAAACGTAGCCTTTGGCTTGGAAGTTAGACGGGTACCCAGGATGGA
AATAGAAAAGAGGGTTAGGGAAGTTCTAGACTTAGTTGGGCTGAGAGGATTTGAAAATAGACTACCTGAGGAACTGAGTG
GAGGGCAACAGCAGAGGGTTGCCCTGGCGAGGGCCCTTGTAATAGAGCCCGATGTACTGCTCCTCGATGAGCCCCTTAGT
AATCTCGATGCGAAGGTCAGGGAAAAGCTTAGGGGGGAAATTAAGAGGATAGTGAAGGAGCTCGGCATAACGACAATTTA
CGTTACCCACGATCAGGAAGAGGCCATGGTGCTAAGCGATAGGATAGCGGTTATGAACTTTGGAAGGATAGAGCAGGTTG
GTGAACCTTACGATCTTTACTATAACCCGAAAAACGAGTTCGTCGCGAATTTCCTGGGGATAAGTAATATAGTGGAACTT
GAAGCTAAGGAAGGAAGAGCATGCTTGGGTGATCTTTGCTTTGAAGTTGGTAGGGAGGGGAAGGGGAAGATATTCTTTAG
GCCTGAGAACGTAGCGGTTGGAGAAGGGATTGAGGCCGAGGTTATAGGTTATGAGCTCCTTCCAGGGAGGGTAAGGCTGA
GGTTATCAATCGAGGGGAGGGAGATAATAGCTGAGGAACTTTTGAGTAGGATTGGAAAGAAAATTCCAAAAAAGGTTAGA
ATTAGAGTTAGAGAATTCAAGATACTTCCTTAG

Protein sequence : 
MVSIELRDIIKRFGEFELKVSLSVKDGELLTLLGPSGCGKTTTLRIIAGLEKPDKGRVYFDGRDITDLPPYERNIGLVFQ
DYALFPHMTVFKNVAFGLEVRRVPRMEIEKRVREVLDLVGLRGFENRLPEELSGGQQQRVALARALVIEPDVLLLDEPLS
NLDAKVREKLRGEIKRIVKELGITTIYVTHDQEEAMVLSDRIAVMNFGRIEQVGEPYDLYYNPKNEFVANFLGISNIVEL
EAKEGRACLGDLCFEVGREGKGKIFFRPENVAVGEGIEAEVIGYELLPGRVRLRLSIEGREIIAEELLSRIGKKIPKKVR
IRVREFKILP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-35 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PH1350 NP_143233.1 ATP-binding transport protein BAC0604 Protein 3e-57 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PH1350 NP_143233.1 ATP-binding transport protein VFG1206 Protein 4e-43 43