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Name : clpB (CPn0144) Accession : NP_224352.1 Strain : Chlamydophila pneumoniae CWL029 Genome accession: NC_000922 Putative virulence/resistance : Virulence Product : Clp protease ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 177963 - 180563 bp Length : 2601 bp Strand : + Note : - DNA sequence : ATGGAGAAATTTTCCGATGCTGTCTCTGAAGCTTTAGAGAAGGCTTTCGAACTTGCTAAATCTTCGAAACATACCTATGT CACAGAAAATCACCTATTACTGGCTTTATTAGAAAATACAGAGTCTCTCTTTTATTTGGTAATTAAGGACATTCATGGGA ACCCTGGTTTGCTCAATACGGCAGTTAAAGATGCGCTCTCACGAGAGCCGACTGTAGTTGAAGGAGAGGTGGATCCTAAA CCTTCTCCGGGTTTACAAACCCTTCTTAGGGATGCCAAACAAGAGGCAAAGACATTAGGAGATGAATACATTTCTGGAGA TCATCTGCTGCTTGCTTTTTGGAGTTCAAACAAAGAGCCTTTTAATTCTTGGAAGCAAACAACAAAAGTTAGTTTTAAAG ATCTTAAGAATCTGATTACTAAAATACGACGAGGAAATCGTATGGATTCGCCAAGCGCTGAAAGTAATTTTCAGGGTTTA GAAAAGTATTGTAAAAATTTAACAGCATTAGCTCGTGAAGGTAAACTGGATCCTGTGATCGGTAGAGATGAAGAAATTCG TAGAACCATCCAAGTGCTTTCCCGTAGAACTAAAAATAACCCTATGCTTATTGGTGAGCCGGGTGTAGGGAAAACTGCTA TAGCAGAAGGATTAGCTCTTAGGCTTATCCAGGGTGATGTTCCTGAATCTCTCAAAGGTAAACAGCTTTATGTCTTAGAT ATGGGAGCTTTGATTGCAGGAGCTAAGTATCGAGGTGAGTTTGAAGAAAGACTAAAGAGTGTTTTAAAAGATGTAGAATC TGGAGATGGCGAGCACATTATCTTTATTGATGAGGTGCATACTCTTGTTGGAGCAGGAGCTACTGATGGAGCTATGGATG CTGCGAATCTTTTAAAGCCTGCATTAGCAAGAGGGACGCTACACTGTATTGGCGCGACGACTTTGAATGAGTATCAGAAG TATATTGAAAAAGATGCTGCTTTGGAACGTCGATTTCAGCCTATTTTTGTGACAGAGCCTTCTTTGGAGGATGCTGTCTT TATTCTTCGTGGACTAAGAGAAAAATATGAAATTTTCCATGGAGTCAGGATTACAGAGGGGGCTTTGAATGCCGCAGTCC TACTTTCCTATCGTTATATCCCAGATCGCTTTCTTCCAGATAAGGCTATCGATTTGATAGATGAAGCGGCAAGTTTAATT CGCATGCAAATTGGTAGTCTTCCTCTTCCTATTGATGAAAAGGAGAGAGAGCTTGCTGCTTTGATCGTTAAGCAAGAGGC TATAAAACGCGAGCAATCTCCTTCCTATCAAGAAGAGGCGGATGCTATGCAGAAGTCTATAGATGCTTTGAGAGAGGAAT TAGCATCTCTACGTTTGGGTTGGGATGAAGAGAAGAAGTTGATTTCGGGGCTCAAGGAAAAAAAGAATTCCTTGGAAAGT ATGAAATTTTCTGAAGAGGAGGCGGAGCGTGTTGCAGACTATAATCGTGTAGCTGAGCTTCGGTATAGTTTAATTCCCCA ACTTGAAGAAGAAATCAAACAGGATGAAGCCTCTTTAAATCAAAGAGATAACCGTCTCCTTCAAGAAGAAGTTGACGAGC GATTGATTGCGCAAGTGGTAGCTAATTGGACAGGGATTCCTGTGCAAAAAATGCTAGAAGGGGAAGCTGAGAAACTGTTA ATTCTTGAAGAATCCTTAGAAGAACGTGTGGTAGGACAGCCTTTTGCAGTCTCTGCGGTTAGTGATTCTATTCGTGCTGC ACGTGTAGGTTTAAATGATCCTCAACGTCCCTTAGGAGTCTTTTTATTTTTAGGGCCAACAGGGGTAGGAAAAACCGAGC TTGCAAAAGCTCTTGCAGATCTTCTTTTCAATAAAGAGGAAGCTATGGTCCGCTTCGATATGTCAGAGTATATGGAAAAG CATTCCATTTCCAAGCTTATAGGATCTTCTCCAGGGTATGTGGGTTATGAGGAAGGTGGGAGTCTTTCTGAGGCTCTTCG ACGACGTCCCTATTCAGTAGTTCTCTTTGATGAGATAGAGAAAGCAGATAAGGAAGTTCTAAATATCCTTTTACAGGTTT TTGATGATGGGATTCTTACGGATGGGAAAAAACGCAAAGTAAATTGTAAAAATGCCTTGTTTATCATGACATCAAATATA GGTTCTCCAGAACTTGCAGATTATTGTTCAAAAAAAGGAAGTGAGCTTACGAAAGAAGCGATTCTTTCTGTAGTCTCTCC AGTATTGAAAAGATACTTGAGCCCTGAATTTATGAACCGAATTGATGAGATACTTCCTTTTGTTCCATTAACGAAAGAAG ATATCGTGAAAATAGTTGGCATTCAAATGCGAAGGATTGCCCAGAGATTAAAGGCACGGCGGATCAATTTATCTTGGGAT GATTCTGTAATATTATTTCTTAGTGAACAGGGTTATGACAGTGCTTTCGGAGCCCGCCCTTTAAAACGTTTGATCCAACA AAAAGTTGTGATCTTGCTTTCTAAGGCTTTGCTTAAAGGAGATATTAAACCTGATACATCGATTGAGTTGACGATGGCAA AAGAGGTGCTCGTATTTAAAAAAGTGGAAACTCCTTCTTAG Protein sequence : MEKFSDAVSEALEKAFELAKSSKHTYVTENHLLLALLENTESLFYLVIKDIHGNPGLLNTAVKDALSREPTVVEGEVDPK PSPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEPFNSWKQTTKVSFKDLKNLITKIRRGNRMDSPSAESNFQGL EKYCKNLTALAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRLIQGDVPESLKGKQLYVLD MGALIAGAKYRGEFEERLKSVLKDVESGDGEHIIFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGATTLNEYQK YIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLI RMQIGSLPLPIDEKERELAALIVKQEAIKREQSPSYQEEADAMQKSIDALREELASLRLGWDEEKKLISGLKEKKNSLES MKFSEEEAERVADYNRVAELRYSLIPQLEEEIKQDEASLNQRDNRLLQEEVDERLIAQVVANWTGIPVQKMLEGEAEKLL ILEESLEERVVGQPFAVSAVSDSIRAARVGLNDPQRPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEK HSISKLIGSSPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVLNILLQVFDDGILTDGKKRKVNCKNALFIMTSNI GSPELADYCSKKGSELTKEAILSVVSPVLKRYLSPEFMNRIDEILPFVPLTKEDIVKIVGIQMRRIAQRLKARRINLSWD DSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSKALLKGDIKPDTSIELTMAKEVLVFKKVETPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_224352.1 | Clp protease ATPase | VFG2084 | Protein | 1e-99 | 41 |
| clpB | NP_224352.1 | Clp protease ATPase | VFG2076 | Protein | 9e-114 | 41 |
