Gene Information

Name : jhp0947 (jhp0947)
Accession : NP_223664.1
Strain : Helicobacter pylori J99
Genome accession: NC_000921
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1052137 - 1053537 bp
Length : 1401 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGCGTTGAAGACTTTTTTAAAAAAATCCCTTATTCTGTTACTAGCAATTGCCTTAAACCACTTAAACGCTGTGGC
TATGATTGTGGATAATCCTACGCAGAACGCTTGGAATGGTGCTAAAAGAGCATGGGATGAAAGCAAGTGGGCTAAACATT
TAGCCACTATTACTGAAAGGATCAAGCTCGCTCAAGACACATTAGATAGGGCTAATCAGACGCTTAATTCCATCAACAAA
GTGAATGATGTTTTGAACAAAACCAATCAATTTCTAACAGGCAGTATTTTAAGCATCCCCAATCCCATGCAGTATGTAGA
AAAAATCCAAAGTTTTGCCAAGCAAGTTCAAGCCAATACTGAAAGGATCAAAGAAAATGCACAAAACTATGATATACGCA
ATCAAATTGCAGCCAAACGCATCTCTGAAAAATGCCCTGAACTCAATTGGGATGTCAGTCAAGACGCGAGCCCTACAGAG
AAAAACTTACACCAATTTTTCACGAGCAAGGGGAAAGAAAGCGCTAACACAAAGGCTCTAAAGGATTTTGCTAACGCCAT
AGGTAACACTCAAATCAGCACGGCGAACGATTTAGGAGCTGGACTTAGAGGCAGAGCCTTATTAGAATACATTTGCATTC
AAAAAGGCAATTTAGAAGCGGCTAAAAAAATCCAATTATTAGACAGCCAAATGACTTTAGCTCTACTCAATAACGACTAT
ACGGCTTATGAAAAACTTAGAGCTGAAAAAGAAGAATTAAAAAGACAAATCGCTTCAAATGTGTATGCGAAAGTCAAACA
GCTTGTTGTAGCTTCCCAAGATAGAGCGTTTAGTCAAATGGATAATGAGTTGGGCGTTAAAACTTTTGGGTTCAACGATG
AGAATGTTAAAAAAGGTTATTGCAAGAAAGAAAACAGAAATGGCAAAAGCGAGTGCATCCCTAACATGCTCAATGTTAAT
CGCTTAAAAGCGCAATTTGATGAGCTTAATTTAGATTATAGTAGGGATATTGCTGGTAAAAAAGGTGAAGCAGCCGCTAA
AGTGTTCAATGACTACAAACACCGATTCCAACAATTAAGCGTAGAAACTGCTTTAGAAATCGCTCAAAATTTAAGTTTTA
TGAATAAGACGCTAGGTTTAATGGTGCAAATGCAAAGCTATGCATTCAAGCAACAAATGGGCTATTTTGAAGATATTATT
CCTGCTGACGCCCTAAAAGATGACAAAGAGCATCAAGAAAATCTTGAACAAAAACAACAAGAAATAGAGAAAGTCTATAG
GGCTAAATTAGACGCTTATGGTTTCCCTAATGGTAGTGTAGGAAAGGCAAGTGGCGTGAATTCAAATAGTAATAATGAAG
CCCCAAGCTCTGATAATATCCAGTCGTTTAATCCGTATTGA

Protein sequence :
MKALKTFLKKSLILLLAIALNHLNAVAMIVDNPTQNAWNGAKRAWDESKWAKHLATITERIKLAQDTLDRANQTLNSINK
VNDVLNKTNQFLTGSILSIPNPMQYVEKIQSFAKQVQANTERIKENAQNYDIRNQIAAKRISEKCPELNWDVSQDASPTE
KNLHQFFTSKGKESANTKALKDFANAIGNTQISTANDLGAGLRGRALLEYICIQKGNLEAAKKIQLLDSQMTLALLNNDY
TAYEKLRAEKEELKRQIASNVYAKVKQLVVASQDRAFSQMDNELGVKTFGFNDENVKKGYCKKENRNGKSECIPNMLNVN
RLKAQFDELNLDYSRDIAGKKGEAAAKVFNDYKHRFQQLSVETALEIAQNLSFMNKTLGLMVQMQSYAFKQQMGYFEDII
PADALKDDKEHQENLEQKQQEIEKVYRAKLDAYGFPNGSVGKASGVNSNSNNEAPSSDNIQSFNPY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPP12_0441 YP_002301077.1 hypothetical protein Not tested cag PAI Protein 0.0 97