|
Name : join (jhp0922m) Accession : NP_223640.1 Strain : Helicobacter pylori J99 Genome accession: NC_000921 Putative virulence/resistance : Virulence Product : conjugal plasmid transfer system protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3504 EC number : - Position : 1019965 - 1021501 bp Length : 1537 bp Strand : + Note : - DNA sequence : ATGAAAAAATTTACCCTATCGCTATTTTTGTGTTGCACCTTACTTAACGCTGAAGAGGATATTTTTAGGAACAACACAAA TGAAACTGATCTTACAAATTCTTTTGAACATGGCAAAGAAAACAACAATCTTATCCCAGCAAAATCCGATAGTTTAGAAA GTTTCAAAGAACAAGAAAACAAAGAAAAAGCCAAACAGCTTATGGATTTAAAGGCCTTACAGAGCGTGTATTTTTCTAAA AATAGAAAATTGCAAGACAATAATTTCAATGTCTTGTATGTGGCAGGCAACACCAACAAAATCCGCTTACGCTATGCGAT GACTACCACCTTTATTTTTGATAATGATCCTATTATCTATGTGAGTTTAGGAGATCCTAGCGATTTTGAACTCACTTACC CCACTAATGATCATTACGATTTGTCTAACATGCTAGTGATTAAGCCGTTACTTATAGGGGTGGATACGAACCTAACCGTA GTCGGAGCGAGCGGCACAATTTATACCTTATTATTTGTTTAGCACCACTTACACCAGCAAGTTTCAAAGCTATTTTTCAG TGTTTGTTTCTAATAAAAGATCTATCGGAAAGCTCAATATTCTGTCTAAGAGCGAGTTAGAAAAAAGGGAACAAGAATAA TTGGCTAAAACAGAAACGGATAACTTTAATAAACAAGATAAGCACAAGCTTGACTACAGAAAAATCAATTATGAGAGCAA GGAAATTGATGATGGCAAGTTTATAAGAATTGGAGATGAAGTCAATCACATTTTCATTGAAAAAGCTAAAATCAATCGTG GTTATTTGCAAAACCCCAAACACAAACGCACCTGGTGGAGTTTGTGGCTCTATAAAAAACCCAGTGATGACGCGCTTGAT ATAAAGGTGCTAGATGTCTTTGATGATGGCAAATACACTTATTTTAGATATGACAGAGATCAAGCCTTTTCAAAATTTCC TTACACCTATAAGGTTGTAGATGGGTATGATAATCCTATCAATAGCCGTGTGGTAGGGAATTACATTATTGCTGAAGACA TTTCTAAAAAATGGACTTTAAGGAGCGGTAAGGAATACGTGTGCGTGAGAAGAGACAAGCGCAAATACCAAAAGTCTAGG GACTTCATGCGCTTAAAAAGGCTTTTAGAGCAAGATGAAGCCATGAAAGCCAAACGAAATAACATGCATTTGATTGAAGA CACTACGCCTCAACCTAAAAATGCCATTAGCGTAACGGAGTTGTTAGCTCAAATCAAAAACCAAACTCCAAGCAAAGAAT GCCGAGCCTTAAATGAAGAAGAAGTTAAAACTTTAGAAGAGGTTAAAAACATCATAAAAACTCCTAAGCCTTTGCAAAAA GATTTGAAAAAGAACGCTAAAAAACACACCATCAAAACCCAGTATTGCGTGCCTATCCCCTATATAGAAAGACTAAAAAC CACTGATGGTTTAGAGAAGCATCAAAAGGGGCTAAATAACACCAAAAAACAAATTCAAGCAAATCCTATTGAAGAGATTA AAGAAAACAAGAAATGA Protein sequence : MKKFTLSLFLCCTLLNAEEDIFRNNTNETDLTNSFEHGKENNNLIPAKSDSLESFKEQENKEKAKQLMDLKALQSVYFSK NRKLQDNNFNVLYVAGNTNKIRLRYAMTTTFIFDNDPIIYVSLGDPSDFELTYPTNDHYDLSNMLVIKPLLIGVDTNLTV VGASGTIYTYYLFSTTYTSKFQSYFSVFVSNKRSIGKLNILSKSELEKREQEXLAKTETDNFNKQDKHKLDYRKINYESK EIDDGKFIRIGDEVNHIFIEKAKINRGYLQNPKHKRTWWSLWLYKKPSDDALDIKVLDVFDDGKYTYFRYDRDQAFSKFP YTYKVVDGYDNPINSRVVGNYIIAEDISKKWTLRSGKEYVCVRRDKRKYQKSRDFMRLKRLLEQDEAMKAKRNNMHLIED TTPQPKNAISVTELLAQIKNQTPSKECRALNEEEVKTLEEVKNIIKTPKPLQKDLKKNAKKHTIKTQYCVPIPYIERLKT TDGLEKHQKGLNNTKKQIQANPIEEIKENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB9-1 | YP_002301099.1 | VirB9 type IV secretion protein | Virulence | cag PAI | Protein | 0.0 | 94 |
