Gene Information

Name : tnpB (jhp0826)
Accession : NP_223544.1
Strain : Helicobacter pylori J99
Genome accession: NC_000921
Putative virulence/resistance : Unknown
Product : IS606 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0675
EC number : -
Position : 908966 - 910294 bp
Length : 1329 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGTCAATAAGGGTTTTAAATTCCGCTTGTATCCCACTAAAGAACAACAGGATAAATTGCAACACTGCTTTTTTGT
CTATAATCAAGCTTATAATATTGGCTTGAATTTACTGCAAGAGCAATACGAGAAAAACAAAGATTTACCTCCCAAAGAAA
GAACGAGGAAAAAATCAAGCGAGTTAGACAAAGCGATTAAACACCACTTGAACGCTAGGGGGTTAAGCTTTAGTAGTGTG
ATAGCCCAACAATCACGCATGAATGTTGAAAGGGCTTTAAAGGATGCTTTTAAAGTTAAAAATAGAGGCTTTCCTAAATT
CAAGAACTCTAAATCCGCTAAACAATCTTTTTCGTGGAACAATCAAGGTTTCTTTATTAAAGAGAGCGATGAGGAACGCT
TTAAGATATTCACTTTAATGAAAATGCCCTTAATGATGTGCATGCATAGAGACTTCCCTCCTCATTCTAAAGTGAAACAA
ATCGTGATCTCTTGCAGCCATAGAAAATATTTCGTTAGCTTTAGCGTGGAATACGAACAAGACATTACTCCCATCAAAAA
CCCTAAAAATGGTGTGGGGCTAGATTTGAATATCCTTGATATAGCTTGTTCTTGTGGCGTGAATAATCACAAAAAACTAA
CGGACTTTAAGCGATACTCAACAGACATGAAAGAATTACTAGGGATAGAAATAGATGAAGAGTTGGACACTAAACGACTC
ATCCCTACTTATTCCAAATTGTATTCTTTAAAAAAACACTCTAAAAAATTTAAAAGATTGCAAAGAAAACAAAGCCGTAG
GGTGTTAAAGTCTAAACAAAACAAAACCAAATTAGGAGGTAATTTTTACAAAACCCAAAAGAAATTAAACCAAGTCTTTG
ACAAGTCTAGTCATCAAAAAACAGACAGATACCATAAAATCACAAGCGAACTTTCAAAGCAATTTGAATTGATAGTAGTT
GAAGATTTGCAAGTAAAAAACATGACTAAAAGAGCTAAACTCAAAAACGTTAAACAAAAGAGTGGGCTTAATCAATCTAT
TTTAAACACTTCATTCTATCAAATCATCTCTTTTTTAGACTACAAACAACAGCATAATGGCAAATTGTTAGTGAAAGTTC
CCCCACAATATACGAGTAAAACTTGCCATTGTTGTGGGAATATCAACCACAAGCTTAAATTAAATCATAGGCAGTATTGG
TGTTTAGAATGCGGGTATAGAGAACACAGAGACATCAACGCTGCGAACAATATCTTAAGCAAAGGGTTAAGTCTTTTTGG
GGTAGGAAATATCCATGCAGACTTTAAAGAACAAAGCCTTTCGTGTTAG

Protein sequence :
MKVNKGFKFRLYPTKEQQDKLQHCFFVYNQAYNIGLNLLQEQYEKNKDLPPKERTRKKSSELDKAIKHHLNARGLSFSSV
IAQQSRMNVERALKDAFKVKNRGFPKFKNSKSAKQSFSWNNQGFFIKESDEERFKIFTLMKMPLMMCMHRDFPPHSKVKQ
IVISCSHRKYFVSFSVEYEQDITPIKNPKNGVGLDLNILDIACSCGVNNHKKLTDFKRYSTDMKELLGIEIDEELDTKRL
IPTYSKLYSLKKHSKKFKRLQRKQSRRVLKSKQNKTKLGGNFYKTQKKLNQVFDKSSHQKTDRYHKITSELSKQFELIVV
EDLQVKNMTKRAKLKNVKQKSGLNQSILNTSFYQIISFLDYKQQHNGKLLVKVPPQYTSKTCHCCGNINHKLKLNHRQYW
CLECGYREHRDINAANNILSKGLSLFGVGNIHADFKEQSLSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA CAJ31329.1 insertion sequence IS606 transposase homolog A Not tested cag PAI Protein 0.0 97
tnpB AAR03857.1 transposase B-like protein Not tested cag PAI Protein 8e-179 95