Name : tnpB (jhp0826) Accession : NP_223544.1 Strain : Helicobacter pylori J99 Genome accession: NC_000921 Putative virulence/resistance : Unknown Product : IS606 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 908966 - 910294 bp Length : 1329 bp Strand : - Note : - DNA sequence : ATGAAAGTCAATAAGGGTTTTAAATTCCGCTTGTATCCCACTAAAGAACAACAGGATAAATTGCAACACTGCTTTTTTGT CTATAATCAAGCTTATAATATTGGCTTGAATTTACTGCAAGAGCAATACGAGAAAAACAAAGATTTACCTCCCAAAGAAA GAACGAGGAAAAAATCAAGCGAGTTAGACAAAGCGATTAAACACCACTTGAACGCTAGGGGGTTAAGCTTTAGTAGTGTG ATAGCCCAACAATCACGCATGAATGTTGAAAGGGCTTTAAAGGATGCTTTTAAAGTTAAAAATAGAGGCTTTCCTAAATT CAAGAACTCTAAATCCGCTAAACAATCTTTTTCGTGGAACAATCAAGGTTTCTTTATTAAAGAGAGCGATGAGGAACGCT TTAAGATATTCACTTTAATGAAAATGCCCTTAATGATGTGCATGCATAGAGACTTCCCTCCTCATTCTAAAGTGAAACAA ATCGTGATCTCTTGCAGCCATAGAAAATATTTCGTTAGCTTTAGCGTGGAATACGAACAAGACATTACTCCCATCAAAAA CCCTAAAAATGGTGTGGGGCTAGATTTGAATATCCTTGATATAGCTTGTTCTTGTGGCGTGAATAATCACAAAAAACTAA CGGACTTTAAGCGATACTCAACAGACATGAAAGAATTACTAGGGATAGAAATAGATGAAGAGTTGGACACTAAACGACTC ATCCCTACTTATTCCAAATTGTATTCTTTAAAAAAACACTCTAAAAAATTTAAAAGATTGCAAAGAAAACAAAGCCGTAG GGTGTTAAAGTCTAAACAAAACAAAACCAAATTAGGAGGTAATTTTTACAAAACCCAAAAGAAATTAAACCAAGTCTTTG ACAAGTCTAGTCATCAAAAAACAGACAGATACCATAAAATCACAAGCGAACTTTCAAAGCAATTTGAATTGATAGTAGTT GAAGATTTGCAAGTAAAAAACATGACTAAAAGAGCTAAACTCAAAAACGTTAAACAAAAGAGTGGGCTTAATCAATCTAT TTTAAACACTTCATTCTATCAAATCATCTCTTTTTTAGACTACAAACAACAGCATAATGGCAAATTGTTAGTGAAAGTTC CCCCACAATATACGAGTAAAACTTGCCATTGTTGTGGGAATATCAACCACAAGCTTAAATTAAATCATAGGCAGTATTGG TGTTTAGAATGCGGGTATAGAGAACACAGAGACATCAACGCTGCGAACAATATCTTAAGCAAAGGGTTAAGTCTTTTTGG GGTAGGAAATATCCATGCAGACTTTAAAGAACAAAGCCTTTCGTGTTAG Protein sequence : MKVNKGFKFRLYPTKEQQDKLQHCFFVYNQAYNIGLNLLQEQYEKNKDLPPKERTRKKSSELDKAIKHHLNARGLSFSSV IAQQSRMNVERALKDAFKVKNRGFPKFKNSKSAKQSFSWNNQGFFIKESDEERFKIFTLMKMPLMMCMHRDFPPHSKVKQ IVISCSHRKYFVSFSVEYEQDITPIKNPKNGVGLDLNILDIACSCGVNNHKKLTDFKRYSTDMKELLGIEIDEELDTKRL IPTYSKLYSLKKHSKKFKRLQRKQSRRVLKSKQNKTKLGGNFYKTQKKLNQVFDKSSHQKTDRYHKITSELSKQFELIVV EDLQVKNMTKRAKLKNVKQKSGLNQSILNTSFYQIISFLDYKQQHNGKLLVKVPPQYTSKTCHCCGNINHKLKLNHRQYW CLECGYREHRDINAANNILSKGLSLFGVGNIHADFKEQSLSC |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tnpA | CAJ31329.1 | insertion sequence IS606 transposase homolog A | Not tested | cag PAI | Protein | 0.0 | 97 |
tnpB | AAR03857.1 | transposase B-like protein | Not tested | cag PAI | Protein | 8e-179 | 95 |