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Name : katA (jhp0809) Accession : NP_223527.1 Strain : Helicobacter pylori J99 Genome accession: NC_000921 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 886867 - 888384 bp Length : 1518 bp Strand : - Note : similar to H. pylori 26695 gene HP0875 DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGCGCTCCCGTTTGGGATGACAACAATGTGATTACGGCCGGCCC TAGAGGTCCTGTTTTATTACAAAGTACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGACAGAGAAAGAATCCCTGAAAGGG TAGTGCATGCTAAAGGAAGCGGGGCTTATGGCACTTTTACCGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACCGAATGCTTTTTCAGATTTTCCACTGTGGCTGGTGAAAAAGGCAGCGCGGATGCGGT AAGAGACCCAAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTAGTAGGGAACAACACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTCATCCACACTCAAAAACGAGATCCTCAAACCAATTTGCCTAACCCT GACATGGTATGGGATTTTTGGAGTAATGTTCCTGAAAGCTTGTATCAAGTAACATGGGTTATGAGCGATAGAGGTATCCC TAAATCTTTCCGCCACATGGATGGTTTTGGTAGCCACACTTTCAGTCTTATCAACGCTAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTGAAACCATGCAAGGCGTTAAGCACTTGACTAATGAAGAAGCCGCAGAAGTTAGGAAATATGATCCGGAT TCAAACCAAAGGGATTTATTCGATGCGATCGCTGGAGGGGATTTCCCAAAATGGAAAATGAGCATTCAAGTGATGCCAGA AGAGGACGCTAAAAAGTATCGATTCCATCCGTTTGATGTGACTAAAATCTGGTATCTCCAAGATTATCCGTTAATGGAAG TGGGCATTGTGGAGTTGAATAAAAATCCTGAAAACTATTTCGCAGAAGTGGAACAAGCGGCATTCACTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTGCAAGGGCGCTTGTTCTCTTATGGAGACACACACCGCTACCGCTT AGGGGTTAATTATCCTCAGATACCGGTTAACAGGCCAAGATGCCCATTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGGTACTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCTGGCTATAAAGAAGATAAGAGCGCTAGGGATCCT AAGTTCAACTTGGCTCATATTGAAAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGAAGATAGCGATTACTACAC CCAACCAGGTGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGTATGACACTATTGGAGGGTCTTTAGCTC ATGTTACCCATAAGGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGCAAAAGACATGCATCACATGAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNP DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFETMQGVKHLTNEEAAEVRKYDPD SNQRDLFDAIAGGDFPKWKMSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNRPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRAEDSDYYTQPGDYYRSLPADEKERLYDTIGGSLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHAKDMHHMKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 3e-135 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 3e-91 | 51 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 2e-89 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 2e-89 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 2e-89 | 47 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 2e-89 | 47 |
