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Name : hsdM_2 (jhp0786) Accession : NP_223504.1 Strain : Helicobacter pylori J99 Genome accession: NC_000921 Putative virulence/resistance : Unknown Product : type I restriction enzyme modification subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 865462 - 867048 bp Length : 1587 bp Strand : - Note : similar to H. pylori 26695 gene HP0850 DNA sequence : ATGGAAAACACAAACAAAGCGAGCGCGAAATTGAATAACCATGCTTCATTAGCGCGTAACGAATTGCACAACACCATTTG GAAAGTGGCGAACGAATTGAGAGGCTCAGTGGATGGCTGGGATTTCAAACAATACGTTTTAGGCATTCTTTTTTACCGCT ACATTTCAGAAAACATGGCTAATCACCACAATGAATACGAGCGAAAGATTGATCCTAACTTTGATTACGCTTCATTAAGC GATGAAGAGGCTGAAATCGTAAGAAAATCAACCATTGAAGAAAAAGGCTTTTTCATCCCGCCAAGCGCTTTATTTTGTAA CGTGTTAAAAAACGCGCCCAATAACGAAGATCTCAATGTAACCTTACAAAATATTTTTAACGAAATAGAAAAATCCAGCC TTGGCACTCCATCAGAAGAAAACGTCAAAGGCTTGTTTGCGGATTTAGACGTCAATAGCAACAAGTTAGGGAGCTCTCAT CAAAATAGGGTGGAAAAATTGACTAAAATCCTTCAAGCCATAGGGGGCATGCAATTAGGCGATTACCAACAAAGCGGGAT CGATGTTTTTGGCGACGCTTATGAATATTTAATGGCGATGTATGCGAGCAATGCCGGCAAAAGCGGAGGGGAATATTTCA CCCCCCAAGAAGTGAGCGAACTGCTCGCTAAAATCACCCTGCACAACCAAGAGAACATTAATAAAGTTTATGACCCATGT TGCGGGAGCGGATCGTTACTCTTACAATTTTCTAAAGTGTTAGGCGATAAAAACGTCTTAAAAGGGTATTTTGGGCAAGA AATCAATTTGACCACTTACAACCTCTGCCGTATCAACATGTTTTTGCATGACATCAATTATTCTAAATTCCACATCGCGC TAGGAGACACGCTTTTAGACCCCAAGCATGAAGACGATGAGCCTTTTGATGCGATCGTTTCCAACCCTCCCTATTCCACT AAATGGATAGGCGATAACAACCCCCTTTTAATGAACGATGAGCGTTTTAATAAGGCCGGTGCGCTAGCGCCCAAAAACGC CGCCGATCTCGCCTTCACCATGCACATGCTTTCTTATTTATCCAATCAAGGCGCTGCTGCGATCGTGGAATTTCCCGGGG TGCTTTATAGAAGCGGTGCCGAAAAGAAAATCAGAGAGTATTTAGTCAAAGAAAATTTCATTGACTGCGTGATCGCTTTA CCTGAAAACCTCTTTTTTGGAACGAATATCGCCACTTGCATTTTAGTGCTTAAGAAAAACAAAAAAGACGACACCACGCT TTTTATTGATGCGAGTAAGGAATTCCTCAAAGAGGGCAAAAAAAACAAACTCAAAGCGCATAACCGAGAAAAGATTTTGC AAACCTATATTGAAAGGAAAGCGATCAAGCATTTTTCGGCTCTAGCCAATATAGAGAAAATCCAAGAAAACGATTACAAC CTATCCGTCAACCGCTACGTGGAGCAAGAAGACACGAAAGAAATCATTGACATTAAGGCGCTTAATGGCGAGATTTCTCA AATCGTAAAAAAACAAAGCGTTTTAAGAAACAGCCTTGAATCCATCATCAAAGAGCTAGAAATTTAA Protein sequence : MENTNKASAKLNNHASLARNELHNTIWKVANELRGSVDGWDFKQYVLGILFYRYISENMANHHNEYERKIDPNFDYASLS DEEAEIVRKSTIEEKGFFIPPSALFCNVLKNAPNNEDLNVTLQNIFNEIEKSSLGTPSEENVKGLFADLDVNSNKLGSSH QNRVEKLTKILQAIGGMQLGDYQQSGIDVFGDAYEYLMAMYASNAGKSGGEYFTPQEVSELLAKITLHNQENINKVYDPC CGSGSLLLQFSKVLGDKNVLKGYFGQEINLTTYNLCRINMFLHDINYSKFHIALGDTLLDPKHEDDEPFDAIVSNPPYST KWIGDNNPLLMNDERFNKAGALAPKNAADLAFTMHMLSYLSNQGAAAIVEFPGVLYRSGAEKKIREYLVKENFIDCVIAL PENLFFGTNIATCILVLKKNKKDDTTLFIDASKEFLKEGKKNKLKAHNREKILQTYIERKAIKHFSALANIEKIQENDYN LSVNRYVEQEDTKEIIDIKALNGEISQIVKKQSVLRNSLESIIKELEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0053 | YP_300143.1 | type I restriction-modification system methyltransferase subunit | Not tested | SCC15305cap | Protein | 1e-96 | 42 |
