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Name : hom (jhp0761) Accession : NP_223479.1 Strain : Helicobacter pylori J99 Genome accession: NC_000921 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 839646 - 840911 bp Length : 1266 bp Strand : + Note : catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGCGTGGGGAGCACGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATTAAAGACAGAGCCGGCGTGGAAATTAAAATTAAAAAAGCGGTGGTGCGAGACGTGAAAAAACACAAGGGCT ATGCTTTTGAAATCAGTGATGATTTAGAAAGCGTGATAGAAGATAAAGGGATTGATATTGTCGTGGAGCTTATGGGTGGG GTGGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCGTTACAGCCAATAAAGCCATGTTAGC GTACCACCGCTATGAATTAGAACAAATCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGTGGGGGTATCCCCA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACGAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCGCAGCATTTAGGCTATGCGGAATT GAACCCTGAATTTGACATTAAGGGCATTGATGCGGCGCACAAATTATTGATTTTAGCGTCTTTAGCGTATGGCATTGATG CGAAATTAGAAGAAATCTTGATTGAAGGCATTGAAAAGATAGAGCCAGATGACATGGAATTTGCAAAAGAGTTTGGTTAT AGCATCAAACTTTTAGGCATCGCTAAAAAACACCAGGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAATGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATCAGCGTCATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGAGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA ATGCTGGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTACTATGCGCGCTTGTT AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATCAGCGCGATTTTAGCCCAAAATGATATTTCGCTCAACAATGTCTTGC AAAAAGAAATCCCGCAATCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAATCTATGCTGAACGCC CTTAAAGAGCTTGAAAATTTACAAAGCGTGTTGGATACCCCTAAAATGATCCGTTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSTVAKILQENQEIIKDRAGVEIKIKKAVVRDVKKHKGYAFEISDDLESVIEDKGIDIVVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQIAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHQDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEIPQSNKAKILFSTHTTNEKSMLNA LKELENLQSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 8e-68 | 42 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 8e-68 | 42 |
