Gene Information

Name : cagQ (jhp0483)
Accession : NP_223201.1
Strain : Helicobacter pylori J99
Genome accession: NC_000921
Putative virulence/resistance : Virulence
Product : cag island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 530698 - 531078 bp
Length : 381 bp
Strand : -
Note : similar to H. pylori 26695 gene HP0535

DNA sequence : 
ATGCTTCCTACTAAAACACGCATTAGAGATCCGAACAAGCAAGAACTTACACAACCAAAAATAAAAGGATTGAGTATGGG
AAAAATTTTAGCTTCTTTGTTGGGTGGCGGAACAAATCTTTTTACAGGTTTATCCAGTGATTTGTTTTCTATGATATTAA
ATTTTTTGTTCTTCCTGATGTTAATGATGGGACTTAATGAAGCATTAGGGAAAAAATTTAACTTGCCTATGGACAATATC
AAGAATTTTATGGCAGAAGTGCTGAAGAATGGATTCGATAGTATCAAAAACATGGGATCTGCTTTGGTTGGTAATGGTTT
TGGTAGCAGCAAATCAGACAAAACCACTAATAAAATGAGTGTCCCACAAGTAAGACTCTAG

Protein sequence : 
MLPTKTRIRDPNKQELTQPKIKGLSMGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEALGKKFNLPMDNI
KNFMAEVLKNGFDSIKNMGSALVGNGFGSSKSDKTTNKMSVPQVRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagQ NP_223201.1 cag island protein Virulence cag PAI Protein 3e-32 100
HP0535 BAD13868.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-32 99
HP0535 BAD14033.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-31 98
cagQ AAC44691.1 CagQ Virulence cag PAI Protein 2e-31 98
cag14 AAR03897.1 Cag14 Virulence cag PAI Protein 2e-31 98
cag14 AAR03958.1 Cag14 Virulence cag PAI Protein 2e-31 98
cag14 AAR03927.1 Cag14 Virulence cag PAI Protein 8e-32 98
cagQ YP_003728730.1 cag pathogenicity island protein Q Virulence cag PAI Protein 4e-31 98
cag14 AAR03869.1 Cag14 Virulence cag PAI Protein 6e-31 97
HP0535 NP_207331.1 cag pathogenicity island protein (cag14) Virulence cag PAI Protein 6e-31 97
HP0535 BAD13951.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-27 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cagQ NP_223201.1 cag island protein VFG0294 Protein 2e-31 97