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Name : glnA (jhp0461) Accession : NP_223179.1 Strain : Helicobacter pylori J99 Genome accession: NC_000921 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : - Position : 501230 - 502675 bp Length : 1446 bp Strand : - Note : similar to H. pylori 26695 gene HP0512 DNA sequence : ATGGTAGTAAGAACTCAAAATAGCGAAAGCAAGATCAAAGAGTTTTTTGAATTTTGCAAAGAAAATGAAGTAGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAACCATATCGCTTATTCTTTTGGGGCTTTAACGCATGATATGTTTA AAGAAGGGATTCCTTTTGATGCGAGCTCTTTTAAAGGCTGGCAAGGCATTGAACACTCCGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGTGCGGATGTGAGCGCGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAAAAATGCCCTAGAAGTATCGCTAAAAAAGCCCTAAAACATTTAAGAGATTTAGGCTTGGGCGATGTGG CTTATTTTGGCGCGGAGAATGAATTTTTTATCTTTGATTCTATTAAGATTAAAGACGCTTCCAATTCCCAATACTACGAA GTGGATAGCGAAGAGGGCGAATGGAATAGGGATAAAAGCTTTGAAAACGGCGTGAATTTTGGGCATAGACCGGGAAAGCA AGGAGGCTATATGCCTGTGCCTCCAACGGATACGATGATGGATATTCGCACAGAAATCGTGAAAGTCTTAAACCAAGTGG GGTTAGAAACTTTTGTCGTTCATCATGAAGTCGCGCAAGCGCAAGGCGAAGTGGGCGTAAAATTTGGGGATTTAGTGGAA GCCGCTGATAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAATGGGAAAACGGCTACTTTCATGCC AAAACCCCTATATGGGGATAATGGGAGTGGGATGCACACCCATGTGAGTATTTGGAAGAATAACGAAAACCTTTTTGGTG GCGAAACTTACAAGGGCTTGAGCGAGTTTGCGTTGTATTTTTTAGGGGGCGTGTTGCGCCACGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACCAATTCTTACAAACGCCTGATTCCGGGATATGAAGCCCCATCCATTTTAACTTATTCAGCCAG CAATAGGAGCGCTAGCGTGCGTATCCCTTATGGGATTTCTAAAAATAGTGCTAGGTTTGAATTCAGGTTTCCTGACAGCT CATCAAACCCCTACCTGGCTTTTGGGGCTATTTTAATGGCGGGCATTGATGGCATTAAAAATAAAATGGATCCCGGCGAA GCGATGGACATTAACCTTTTCAAGCTAACTTTGGACGAAATCAGAGAAAAAGGCATCAAACAAATGCCCCACACTTTAAG GAGATCGTTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAGGGTCAGGTCTTTAGCGAAGAATTTATCCAGGCCT ATCAGTCTCTTAAATTCCATTCTGAAGTGTTCCCATGGGAGAGTAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MVVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHDMFKEGIPFDASSFKGWQGIEHSDMILTPD LVRYFIDPFSADVSAVVFCDVYDVYKNQPYEKCPRSIAKKALKHLRDLGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDKSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSIWKNNENLFGGETYKGLSEFALYFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSASNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFGAILMAGIDGIKNKMDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKEGQVFSEEFIQAYQSLKFHSEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | NP_223179.1 | glutamine synthetase | VFG1399 | Protein | 6e-88 | 45 |
