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Name : jhp1106 (jhp1106) Accession : NP_223823.1 Strain : Helicobacter pylori J99 Genome accession: NC_000921 Putative virulence/resistance : Unknown Product : nucleoside transporter Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG1972 EC number : - Position : 1228869 - 1230125 bp Length : 1257 bp Strand : - Note : similar to H. pylori 26695 gene HP1180 DNA sequence : ATGATTTTTAGCTCTCTTTTTAGTGTTGTAGGGATGGCGGTGCTTTTTCTTATTGCTTGGGTGTTTTCTGGCAATAAAAG GGCTATAAATTATCGCACGATTGTCAGCGCCTTTGTGATTCAAGTGGCTTTAGGGGCGTTGGCTTTATATGTGCCTTTGG GCAGAGAAATACTGCAGGGTTTAGCTAGCGGCATACAAAGCGTGATTGGTTACGGCTATGAGGGGGTACGCTTTTTATTT GGCAATCTCGCTCCAAACGCTAAGGGCGATCAAGGGATAGGAGGCTTTATCTTTGCGATCAACGTTTTAGCGATCATTAT CTTTTTTGCTAGCTTGATTTCACTTCTATATTATTTAAAAATCATGCCTTTAGTGATCAACCTCATCGGCGGGGCGTTGC AAAAATGCTTAGGCACTTCTAAAGCAGAAAGCATGAGCGCAGCGGCTAATATTTTTGTGGCGCACACCGAAGCGCCCTTA GTCATTAAACCCTATTTGAAAAGCATGAGCGATTCAGAGATTTTTGCGGTCATGTGCGTGGGCATGGCTAGCGTTGCGGG GCCTGTGTTAGCCGGGTATGCGAGCATGGGCATTCCTTTACCTTATTTAATCGCCGCATCGTTTATGTCCGCTCCTGGGG GGTTGTTGTTCGCTAAAATCATTTACCCGCAAAACGAAACCATTTCTAGCCATGCAGATGTTTCTGCAGAAGAGCATGTC AATATTATAGAAGCTATCGCTAATGGGGCAAGCACAGGGCTTCATTTAGCCTTGCATGTGGGGGCGATGCTTTTAGCCTT TGTGGGGATGCTCGCGCTCGTTAACGGGCTTTTAGGGGTTGTAGGGGGATTTTTAGGCATGGAGCATTTGTCTTTAGGGG TGGTTTTAGGCACGCTTTTAAAACCTTTGGCCTTTATGTTAGGCGTTCCTTGGAGCCAAGCCGGGATTGCCGGGGAAATC ATAGGCATTAAAATCGCGCTCAATGAATTTGTGGGCTATATGCAATTATTGCCTTATTTGGGCGATAACCCTCCTTTAAT CTTGAGCGAGAAAACCAAAGCGATCATCACCTTTGCGTTGTGCGGATTCGCTAACTTAAGTTCAGTCGCCATGCTCATTG GGGGGCTTGGCAGTTTAGTGCCTAAAAAGAAAGATTTCATTGCCAGGCTTGCTTTAAAAGCGGTGCTTGTAGGCACGCTT TCTAATTTCATGAGCGCGACTATCGCCGGGTTATTCATAGGGTTAAGCGCCAATTAA Protein sequence : MIFSSLFSVVGMAVLFLIAWVFSGNKRAINYRTIVSAFVIQVALGALALYVPLGREILQGLASGIQSVIGYGYEGVRFLF GNLAPNAKGDQGIGGFIFAINVLAIIIFFASLISLLYYLKIMPLVINLIGGALQKCLGTSKAESMSAAANIFVAHTEAPL VIKPYLKSMSDSEIFAVMCVGMASVAGPVLAGYASMGIPLPYLIAASFMSAPGGLLFAKIIYPQNETISSHADVSAEEHV NIIEAIANGASTGLHLALHVGAMLLAFVGMLALVNGLLGVVGGFLGMEHLSLGVVLGTLLKPLAFMLGVPWSQAGIAGEI IGIKIALNEFVGYMQLLPYLGDNPPLILSEKTKAIITFALCGFANLSSVAMLIGGLGSLVPKKKDFIARLALKAVLVGTL SNFMSATIAGLFIGLSAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yutK | YP_005163383.1 | putative sodium/nucleoside cotransporter | Not tested | Not named | Protein | 7e-53 | 42 |
