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Name : TP0939 (TP0939) Accession : NP_219375.1 Strain : Treponema pallidum Nichols Genome accession: NC_000919 Putative virulence/resistance : Virulence Product : pyruvate oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : - Position : 1020376 - 1023930 bp Length : 3555 bp Strand : - Note : similar to PID:1001780 SP:P52965 PID:1006618 percent identity: 58.44; identified by sequence similarity DNA sequence : ATGTCTGAGAAGAACCTCGTCATGATGGATGGTAACACCGCAGTGGGGCACGTTGCTCACGCGCTTAGTGAGGTCATTGC TATCTTCCCTATCACTCCCTCCAGTCCTATGGGAGAAATCGCAGACGAATATTCCGCACGGGGGCGCACAAATATCTGGG GTACCGTTCCCACCGTTGTAGAACTTCAGTCTGAGGCAGGCGCTTCGGGAGCTGTTCATGGCGCACTGACGACGGGGGCG CTCTCTTCTACTTTTACTGCTTCTCAGGGATTGCTGCTTATGATCCCGAATATGTATAAGATCGCAGGGGAGCTTACGAG CGCTGTTTTTCACGTTGCTGCACGCGCTGTCGCCACAAGTTCTCTTTCTATCTTTGGTGATCATCAAGACGTGATGGCGT GCCGCCAGACAGGTTGGGCGCTCCTTGCTTCCAACAGTGTTCAGGAGGCCATGGACACCGCAGTTATTGCTCATGCTGCG ACGCTCGAGGCGCGCGTGCCTTTTGTTCATTTTTTTGACGGTTTTAGGACTTCTCATGAGATTCAGAAAATTGAAGAAGT CTCTTATGACGTCATGCGTGCTATGATCGACGACGAACTTGTCCATGCGCACCGCATGCGTGGACTGACTCCCGAAAAGC CAGTGGTCCGCGGCACAGCACAGAATCCTGATGTGTATTTTCAGGTCCGCGAATCAGTGAATAGGTACTATGCGGTTGCG CCCTCCATTGTCCAAAAAGCTATGGACCGCTACGCGGCGCTTACCGGACGCCAGTACCGTCTTTTCGATTACTACGGTGC ACCCGATGCAGAGAAGGTGATTGTCATGATTGGCTCCGGCTCTGAGGCCGTTGAAGAGACAGTTGATGTGCTCAATGCTC AGGGAGGAAAGTGTGGTCTAGTCAAGGTGCGCTTGTATCGCCCGTTCAGCGCAGAGTGTTTTGTCAATGCATTGCCCAAA ACGGTGCAGGCGATTGCAGTGCTCGATCGAACGAAAGAGCCAGGTTCTCTGGGCGAACCTCTCTATGAGGATGTGCGCAC CGCTATCGGCCAGATGCAGAGCCAGAAGAAGTGTCCGTTTACGCATTACCCTCTCGTGCTCGGTGGTCGCTATGGCCTGG GTTCTAAGGAGTTTACGCCCGCGATGGCCAAAGGAGTGTTTGATAACCTCAGTGGGAAGAAGATCCCGAACTTCTCGGTC GGTATAGAGGATGATGTTACGTTCAGCAGCGTAGACTTTGATCCGAACTTTCAGCTTGATGATCAAGATGTGTGTCAGGC GGTGTTCTATGGTCTGGGCTCGGACGGTACAGTAGGCGCGAATAAAAATTCAATTAAGATTATTGGTGAGGCGACGGATA ATAACGCGCAGGCTTACTTTGCCTACGATAGCAAGAAGTCTGGTGGTTTTACTATTTCTCATTTGCGTTTTGGAAAGCAG AAGATCCGTAAGCCCTACCTCATTACGCAGGCGGATTTTGTAGCGTGTCATAAGTTTACGTACCTTGAAACCTTTGACAT GCTCAAAACGCTCAAGCGTGGAGGGACCTTTTTGCTGAATGCGCCGTACAGTGAGCATGAGGTGTGGCATCACATACCCA TAGAAGTCCAGCGTCAGATCATTGAAAAGGAGGTGAAGTTTTACGTCATCGATGCGATTTCTATCGCTCAGAAGGCGGGG ATGGGCACACGTATCAATGTGGTGATGCAAACGGCTTTTTTCAAAATTTTTGGTATCTTGCCGGAAGCTGAGGCGATTGA CCTGATTAAGAAATTTATACAGAAGGCCTACGGCAAAAAGGGTGGGGAGGTTGTACAGAGGAACATCACCACTATCGATA TGGCGCTCGCTGGGGTGGGATTGGTGGAGTATCCGGGAGTTGCCGGTAGTTTGGTGACGCGTCGTCCTGCGATGAGTTCC GATGCTCCGGAGTTTGTGCAAAGCGTGTTAGGTACTATTGCGCTCAATCAGGGGGATAGTCTTGGGGTGAGCGCACTACC AGAGGATGGTACCTATCCTACTGGTACCACGCAGTACGAGAAGCGCTGTATAGCCGAGACTATACCCATTTGGGATCCGT CTGTTTGTATCCAGTGTGGTCAGTGCGCTATGGTGTGTCCTCACGCAGTTATCCGCATGAAAGCGTACGATGGTAAGGAG CTCGAGCATGCGCCTTCTAAGTTTGCTTCCTGTGACTACAAAGGCAAGGAATTTGGGGAGGCGAAGTTTACGATTCAGGT TTCCCCAGAGGACTGCACAGGTTGTGGCCTGTGCGTGCAGCAATGTCCGGCAAAAAATAAGGCTGATCCTACGCGTAAGG CTATCAACATGGAAAGTTTTTCCAAGCACCGTGCGGTGGAGTCTGAGAACTGGGCCTTCTTTGTTAAACTGCCCGATCCT GAGGCGAAGAAGCTCAATTTGAGTCTGCCAAAAGGGGCGTCCATGAAAAGACCTCTTTTTGAGTTCTCTGGTGCCTGCCC AGGCTGCGGGGAGACCCCCTACATCCGCTTGATGACGCAGATTGTTGGGGATCGCGCCATTATCGCGAATGCAACCGGAT GTTCTTCGATATATGGGGGAAATTTGCCTACAACCCCCTATACGACGCGTCCTGATGGTCGCGGCCCCGCTTGGTCAAAT TCTCTTTTCGAAGACGCAGCAGAGTTTGGCTTCGGAATGCGCGTGACTAGTGACAAACTTGCAGAGTATGCCCGCGAGGT TGGACGCAAGTTGCAGGAAAAAGGGGTGGCGGCTGATCTGTTTGCGAGTATTTTTTCTAACCAGCAGGCGGACGATGTTG CAGTGGAAGAGCAGCGTGCCTACGTTAATCAGCTTAAGAAAGTGCTCAGTGAGAGTACTGAACCCCTTGCAAAGGAAATG CTTTCTCTCGTTGACCACCTTATCAAACGCTCGGTGTGGATTTTTGGGGGAGACGGCTGGGCCTATGATATTGGCTACGG TGGTCTAGATCACGTGTTGGCCTCTGGGCGCAATATTACCGTCCTTGTTATGGATACGGAGGTGTATTCCAACACCGGTG GTCAGATGTCGAAGGCCACGCCTATCGGGGCCGTCGCAAAGTTTGCCGCGGCGGGGAAGGAGATCAGTAAAAAGGATATT GGTTTGATGGCCATGAGCTATGGGTATGTGTACGTGGCACGTGTCGCGATGGGAGCGAACATGAGTCAAGTGGTCAAGGC GTTTAGAGAGGCTGAAAGTTATGATGGTCCATCGCTTATTGTCGCCTACAGCCACTGTATTAGCCACGGGATTGATATGT CCAAGGGCATGATTAATCAGAAAGAGGCCGTCGCGTGTGGTTTGTGGCCGTTGTACCGCTACGATCCCCGTCGCATTGCG GAAGGAAAAAATCCATTTCAGCTTGACAGTAAGGAACCTGATTTTAAGCTTGCGGATTTCATGTACAAAGAAGTTCGGTT CAAGACGCTTAAGAATGCAAATCCCGAGCGAGCTGAAATGCTGCTCAAGCGCGCAGAAGAGAAGGCGCGGAGACAGTGGC AAGAGTACAAGTACCTTGCGGACCGTCCGTTCTAG Protein sequence : MSEKNLVMMDGNTAVGHVAHALSEVIAIFPITPSSPMGEIADEYSARGRTNIWGTVPTVVELQSEAGASGAVHGALTTGA LSSTFTASQGLLLMIPNMYKIAGELTSAVFHVAARAVATSSLSIFGDHQDVMACRQTGWALLASNSVQEAMDTAVIAHAA TLEARVPFVHFFDGFRTSHEIQKIEEVSYDVMRAMIDDELVHAHRMRGLTPEKPVVRGTAQNPDVYFQVRESVNRYYAVA PSIVQKAMDRYAALTGRQYRLFDYYGAPDAEKVIVMIGSGSEAVEETVDVLNAQGGKCGLVKVRLYRPFSAECFVNALPK TVQAIAVLDRTKEPGSLGEPLYEDVRTAIGQMQSQKKCPFTHYPLVLGGRYGLGSKEFTPAMAKGVFDNLSGKKIPNFSV GIEDDVTFSSVDFDPNFQLDDQDVCQAVFYGLGSDGTVGANKNSIKIIGEATDNNAQAYFAYDSKKSGGFTISHLRFGKQ KIRKPYLITQADFVACHKFTYLETFDMLKTLKRGGTFLLNAPYSEHEVWHHIPIEVQRQIIEKEVKFYVIDAISIAQKAG MGTRINVVMQTAFFKIFGILPEAEAIDLIKKFIQKAYGKKGGEVVQRNITTIDMALAGVGLVEYPGVAGSLVTRRPAMSS DAPEFVQSVLGTIALNQGDSLGVSALPEDGTYPTGTTQYEKRCIAETIPIWDPSVCIQCGQCAMVCPHAVIRMKAYDGKE LEHAPSKFASCDYKGKEFGEAKFTIQVSPEDCTGCGLCVQQCPAKNKADPTRKAINMESFSKHRAVESENWAFFVKLPDP EAKKLNLSLPKGASMKRPLFEFSGACPGCGETPYIRLMTQIVGDRAIIANATGCSSIYGGNLPTTPYTTRPDGRGPAWSN SLFEDAAEFGFGMRVTSDKLAEYAREVGRKLQEKGVAADLFASIFSNQQADDVAVEEQRAYVNQLKKVLSESTEPLAKEM LSLVDHLIKRSVWIFGGDGWAYDIGYGGLDHVLASGRNITVLVMDTEVYSNTGGQMSKATPIGAVAKFAAAGKEISKKDI GLMAMSYGYVYVARVAMGANMSQVVKAFREAESYDGPSLIVAYSHCISHGIDMSKGMINQKEAVACGLWPLYRYDPRRIA EGKNPFQLDSKEPDFKLADFMYKEVRFKTLKNANPERAEMLLKRAEEKARRQWQEYKYLADRPF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 48 |
