Gene Information

Name : fliP (TP0718)
Accession : NP_219155.1
Strain : Treponema pallidum Nichols
Genome accession: NC_000919
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 785885 - 786700 bp
Length : 816 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
GTGATCCGTGCTCGTGCGTGCGTACGCCGCGCGCTCTTTTTCGTGTCATTGTTTTTCTTCCCGCTTTTTGCACAGGATGC
GCGCGGAGGTGTCGAGCGCGGCGTTACTGGTATCAATGCTGAGCGGCCGGCTTCACGCATTCCTTTCATCAATTTTGATA
TCCGGGAGCCCCAGACCAATCGGGAAGTGGCTTTTTCTGTGCAACTTCTCCTGTTGCTCACGCTCATTTCCCTTGCGCCG
AGTATCTTGCTTTTGATGACTGCCTTTCTGCGCTTGTCTATCGTCCTTGATTTTATCAAACGTGCATTGTCGCTGCAGCA
AGTGCCGCCCACACAGGTTTTACACGGCATAGCATTGTTTCTCGCCCTGTTTATCATGTGGCCGGTCTTTACTGAGATTT
ATGCCAAATCGTTTAAACCTCTTACCGATGGCCAGGTAGATATCCAGACTGCATATACGGAGGCAGAAAGACCGCTGCGT
GTCTTCATGTATCGTCAGATGGCGCATGACCCGTCTTCTGTGCGTCTTTGTATGTCCATGGCAAAGCTGCCTAAGCCAGA
TACACTTGCGGACGTGCCCACGTATGTCCTTATCCCTGCTTTTATCCTGCATGAGCTGACCGTAGCCTTTCAGATTGGTA
TCTTCCTGTACTTACCTTTCATAATTGTTGATATGGTTGTAGCGAGTATTTTGATGTCTATGGGTATGATTATGCTGCCG
CCGGTTCAGATTTCATTGCCGTTTAAATTGGTTTTGTTCGTGCTGGTGGACGGTTGGAATCTGCTGATAGATAGGCTTTT
TCATTCGTTTTTATAA

Protein sequence : 
MIRARACVRRALFFVSLFFFPLFAQDARGGVERGVTGINAERPASRIPFINFDIREPQTNREVAFSVQLLLLLTLISLAP
SILLLMTAFLRLSIVLDFIKRALSLQQVPPTQVLHGIALFLALFIMWPVFTEIYAKSFKPLTDGQVDIQTAYTEAERPLR
VFMYRQMAHDPSSVRLCMSMAKLPKPDTLADVPTYVLIPAFILHELTVAFQIGIFLYLPFIIVDMVVASILMSMGMIMLP
PVQISLPFKLVLFVLVDGWNLLIDRLFHSFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 9e-29 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 9e-29 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 9e-29 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 7e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP NP_219155.1 flagellar biosynthesis protein FliP VFG0044 Protein 2e-28 41