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Name : TP0560 (TP0560) Accession : NP_218999.1 Strain : Treponema pallidum Nichols Genome accession: NC_000919 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 606394 - 608379 bp Length : 1986 bp Strand : - Note : similar to SP:P45694 PID:870922 PID:1405446 GB:AL009126 percent identity: 48.31; identified by sequence similarity DNA sequence : ATGACTGAAGAAGCTATGCGCGCGATGGCACTTTCCATCCGCAGTTTGACGATAGACGCCATCGAACGGGCGAATTCTGG TCACCCTGGTTTGCCGCTGGGCGCAGCAGAGCTTGCTGCCTGTTTATATGGGACGATCTTAAAGCATAATCCGGCGAATC CTAGCTGGTTTAATCGGGATCGTTTCGTCCTGTCTGCAGGACACGGGTCTATGCTCTTGTATGCTGCGCTCCACCTTTCT GGGTACGACGTTTCGCTTGAGGATATTAAGAACTTTAGGCAGGTAGGCTCCCGGTGTCCTGGCCATCCTGAATACGGTTG TACCCCCGGTGTGGAAGCAACAACCGGTCCATTGGGTCAGGGTATCTCTATGGCGGTGGGTTTTGCGCTTGCAGAGGCAA TGCTTGCGGCACGTTTTAATACTGATGAGCATGCCGTTGTAGATCACCACACCTATGCGCTTGTGGGGGAAGGCTGCCTT ATGGAGGGCGTTGCCTCAGAGGCTTCTAGCTTTGCCGGCACTATGCGTCTGGGCAAGCTCATCGTTTTTTATGATGAGAA CCACATCAGCATAGACGGATCTACCGATCTGACCTTTAGCGAGGATGTGGCTAAGCGCTACGAAGCGTATGGCTGGCAGG TGCTGCGCGGTTCTATGTATTCGTATACGGATATTATGGATCTCACTGCGTGTGCAAAGCGTGACGATCGGCCTTCTCTC ATTATCCTGCGTTCGATTATTGGAAAGGGTGCGCCTACCGTTGAAGGGAGCGCGCGTGCCCACGGCGCCCCGCTTGGGGA AGCGGGGGTGAGAGAGGCAAAAAAGGCATTGGGACTTGATCCTGCGTGCTCTTTTTTTGTAGCGCCTGAGCTTACCGCTG TTCTCCAGAAACGAAAGTGTGAATGTGCGCATGTCGAGGACTCGTGGAATGAGCTCTTTGAAGCATGGAGCACGCAGTAT CCTGAAAAACGTGCTGACTGGGACGCTGCTTTTGTTCCCGGAGGGGTAAGTACTTCGCAGCTAGCTCGTGTTGTCTGTCC CCATTTTGAGAAGGGTTCGTCACTTGCTACTCGGACTGCTTCTGGAAAGGTGCTCGACGCGCTCTGCTCTGTGCTACCGA ATCTGGTAGGTGGCTCTGCAGATTTACGCGGGCCGAATGCGGTAGCGGTCTCTTCGTTAAGACCATTTTCTGCAGAGCAT CGTGCAGGCGGCTACTGTTATTTTGGTGTGCGCGAGTTTGCCATGGCAGCCATTGTGAACGGAATGCAGTTGCACGGCGG TTTGCGTGCGTTTGGCGCTACGTTTATGGTTTTTTCAGACTACTTTCGCCCTGCGCTCCGTCTTGCGGCGCTCATGCGCA TCCCTTCTGTTTTCGTTTTAACACATGACTCTATTTTTGTAGGAGAAGATGGGCCGACGCACCAACCGGTGGAGACGCTC GCTGCGCTGCGTGCGATTCCCAACGTGCTTGTTCTGCGCCCTGCTGACGCAGAAGAAACGTTTGAAGCTTGGAAAATAGC GTTGCTGCACCGCAGTGGTCCTGTGTGTATCGTTTTGAGTCGGCAGAACGTGCCGGTTTTTGAGAAAAGTGACAGTTCGT GGCGCTCTACGGTGGAGGAGTCGGGGGCCTATGTAGTGCGCGAAGGGGGTGCTACGCCTGAGCTGACTGTCTTGGCAAGT GGCTCTGAGGTGGATTTGGCGTTGCGTGCCGCGCAGCTGAGTAAAAGACGTGTGCGTGTGGTGTCTGTACTGTGCAAGGA GCGTTTTGAGGCAGCAGGGGACGAGGTGCAGCGGCGCATACAGGGAGGAGCACGCGTTGTAGTGGCTGAGGCAGGGGTGT ATCAAGGCTGGGGAGCGTGGGCAAAGCGGGAAAAATGCCTTGTGCTCGACCGTTTCGGAYAGTCAGGCCCTGGTACGCAG GTGGCACAGGCGCTGGAATTTACCGCCGAAGCGCTGGTGGAAATAATCCTTGATTGGTTAGCATAA Protein sequence : MTEEAMRAMALSIRSLTIDAIERANSGHPGLPLGAAELAACLYGTILKHNPANPSWFNRDRFVLSAGHGSMLLYAALHLS GYDVSLEDIKNFRQVGSRCPGHPEYGCTPGVEATTGPLGQGISMAVGFALAEAMLAARFNTDEHAVVDHHTYALVGEGCL MEGVASEASSFAGTMRLGKLIVFYDENHISIDGSTDLTFSEDVAKRYEAYGWQVLRGSMYSYTDIMDLTACAKRDDRPSL IILRSIIGKGAPTVEGSARAHGAPLGEAGVREAKKALGLDPACSFFVAPELTAVLQKRKCECAHVEDSWNELFEAWSTQY PEKRADWDAAFVPGGVSTSQLARVVCPHFEKGSSLATRTASGKVLDALCSVLPNLVGGSADLRGPNAVAVSSLRPFSAEH RAGGYCYFGVREFAMAAIVNGMQLHGGLRAFGATFMVFSDYFRPALRLAALMRIPSVFVLTHDSIFVGEDGPTHQPVETL AALRAIPNVLVLRPADAEETFEAWKIALLHRSGPVCIVLSRQNVPVFEKSDSSWRSTVEESGAYVVREGGATPELTVLAS GSEVDLALRAAQLSKRRVRVVSVLCKERFEAAGDEVQRRIQGGARVVVAEAGVYQGWGAWAKREKCLVLDRFGXSGPGTQ VAQALEFTAEALVEIILDWLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-113 | 44 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-103 | 41 |
