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Name : clpC (aq_1296) Accession : NP_213889.1 Strain : Aquifex aeolicus VF5 Genome accession: NC_000918 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 918003 - 920435 bp Length : 2433 bp Strand : + Note : - DNA sequence : ATGTTTGAGAAGTTCACAGAAAGGGCAAGACAAGTTATCTTGAGGGCGAGGGAAGAAGCCCTCGAGCTGGGACACAGCTA CTTGGGAAGTGAACATATTTTGCTTGCTCTGATAAAGGATGAGGACATACCCGTCCTCGTCCTCAGCAAGCTGGGTGTCT CTCCTGAGAAGATAAGAAAGGCCATAATGGGCCAAATAACTAAGGGAAGCCACTCGGGAGAGGTACTCTTCGCACCCGAC GCAAAAAGGGTAATAGAGTTTGCAGTTGAAGAAGCGAGAATTCTTCACCACCAGTTCGTAGGTCCCGAACACCTACTTAT CGGAGTGGTTAGAGAAAAGACGGGACTCGGTGGAAGAATTTTAAGGAGCTTTGGACTGGACGAGTACTCCGTAAGGAGAG AGGTACTTCAACTACTCGGAGAACTTCCCCCTCAAGAAAGCCAGAGGTACGTATCCACTCCTAACCTTGACAGGTTCTCA AGGGACCTCACCCAAATGGCAAGGGAAGGAAAGCTCGACCCAGTAATAGGCAGGGAAAAGGAAATAGAGAGAGTTATCCA GATACTCGTAAGAAGAAGGAAGAACAACCCTGTCTTGCTCGGAGACCCCGGAGTTGGTAAGACGGCGATAGTAGAAGGGC TGGCTCAAAGGATAGCAAATAAGGAAGTTCCCGAACCGCTACTCAATAAGAGGGTAGTGGCTTTAGACCTTGCGGCACTA GTTGCGGGAACCAAGTACAGAGGACAGTTCGAAGAAAGGCTTAAGAACATCTTAAAAGAACTTGAGAAGGCTAACAACGT AATACTCTTCATAGACGAACTTCACACACTCGTTGGAGCGGGTTCTGCGGAAGGCTCGATAGACGCATCCAATATGCTAA AACCCGCCCTCGCGAGAGGTGAAATTCAGGTAATAGGAGCTACCACCGTAGACGAGTACAGGAAGTACATAGAAAAGGAC GGAGCACTGGAGAGAAGGTTCCAGCCCGTTTACGTAGAACAGCCATCACCCGAGGATACGATCCAGATACTTTACGGACT CAAACCCAAGTTTGAAGAGTTCCACAAGGTAGAGTACACACCCGAGGCAATAGAAAAGGCTGTGGAACTCTCCGTCAAGT ACATAACCGACAGAAACCTGCCAGATAAGGCTATAGACGTTATGGACGAGGCGGGAGCACTCGTAAAGCTGAAGGCAACT CAACTCCCTCCTGAACTCAAGGAGATAGAGGAAAAGATTAAGGAACTCGAGAAGGAAAAGGAAAAGGCTGTAAAGGAACA GGACTACGAGAAGGCTGCAAAGATAAGGGACGAAGAGTTGAGACTCAGGGCTAAGTTCGAAACGATGAAGGCTAAGTGGA AGGAAGAAATGGAAAAGAACAGACCCAAAGTTACGGACGAGGACGTTGCAGAAGTAGTCGCAAGGTGGACGGGCGTTCCC GTGAAGAGGGTACACGAAAGTGATGCGGAGAAACTCCTCCACATAGAAGAAGAATTGAAGAAGAGGGTTGTAGGTCAGGA CGAGGCTATAAAGGCAGTAGCGAAGGCGATAAGACGTTCAAGAGTCGGACTGAAAGGAAAACACAGACCCATAGGCGTAT TCATGTTCCTAGGACCTACTGGTGTGGGTAAGACCGAAACCGCGAAGGCACTTGCGGAATACCTATTCGGAACGGAAGAC GCACTCATCAGGTTTGATATGTCCGAGTACATGGAAAAGCACACCGTTTCAAGACTAATCGGTGCACCTCCCGGATACGT TGGATACGAAGAAGGTGGACAGCTCACAGAGGCGGTAAGGAGAAGACCTTACAGCGTTCTCCTATTTGACGAAATAGAGA AGGCCCACCCAGACGTATTCAACATCTTCCTCCAGATATTCGACGACGGAAGACTAACGGACGGACTCGGAAGGACCGTT GACTTCTCCAACACCATAATAATCATGACCTCAAACCTCGGAGCTAGACTCATCACAGGCGGAACGATGGGATTCGAAAA GAAACAGGGACTCCTTAACTTCGAAGAGATGAGGAAAAACGTCCTTGATCAGGTAAAGAGAACCTTCAGCCCTGAATTCC TAAACAGACTGGACGAAATTATAGTGTTCAGGCCTCTCGAGAAGAAAGACATAGAACAGATACTCGAACTACAACTAAAA GAGATAAACGAAAAACTAAAAGACTGGAACGTGAGAGTAAAACTCCACAAGTCCTTCGTAAACTGGATCATAGAAAAAGA GTACAAGCCCGAATTCGGAGCAAGGAGCTTGAAGAGGGCTCTCCAAAGACACGTTGAAGATCTGCTCGCTGAAGAACTCA TAAAGGGAACGCTCAAAGGCGTAGAAGAAGTAGAAATAAGGGTAAGGAACGACAAGCCCTACCTCAAACCCGTAAAGAAG AAGGAAAAAGTAGAAGCCCTTCTCGAAAAGTAA Protein sequence : MFEKFTERARQVILRAREEALELGHSYLGSEHILLALIKDEDIPVLVLSKLGVSPEKIRKAIMGQITKGSHSGEVLFAPD AKRVIEFAVEEARILHHQFVGPEHLLIGVVREKTGLGGRILRSFGLDEYSVRREVLQLLGELPPQESQRYVSTPNLDRFS RDLTQMAREGKLDPVIGREKEIERVIQILVRRRKNNPVLLGDPGVGKTAIVEGLAQRIANKEVPEPLLNKRVVALDLAAL VAGTKYRGQFEERLKNILKELEKANNVILFIDELHTLVGAGSAEGSIDASNMLKPALARGEIQVIGATTVDEYRKYIEKD GALERRFQPVYVEQPSPEDTIQILYGLKPKFEEFHKVEYTPEAIEKAVELSVKYITDRNLPDKAIDVMDEAGALVKLKAT QLPPELKEIEEKIKELEKEKEKAVKEQDYEKAAKIRDEELRLRAKFETMKAKWKEEMEKNRPKVTDEDVAEVVARWTGVP VKRVHESDAEKLLHIEEELKKRVVGQDEAIKAVAKAIRRSRVGLKGKHRPIGVFMFLGPTGVGKTETAKALAEYLFGTED ALIRFDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVLLFDEIEKAHPDVFNIFLQIFDDGRLTDGLGRTV DFSNTIIIMTSNLGARLITGGTMGFEKKQGLLNFEEMRKNVLDQVKRTFSPEFLNRLDEIIVFRPLEKKDIEQILELQLK EINEKLKDWNVRVKLHKSFVNWIIEKEYKPEFGARSLKRALQRHVEDLLAEELIKGTLKGVEEVEIRVRNDKPYLKPVKK KEKVEALLEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-177 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | NP_213889.1 | ATP-dependent Clp protease | VFG0080 | Protein | 9e-157 | 56 |
| clpC | NP_213889.1 | ATP-dependent Clp protease | VFG0079 | Protein | 0.0 | 55 |
