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Name : serS (aq_298) Accession : NP_213207.1 Strain : Aquifex aeolicus VF5 Genome accession: NC_000918 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 193284 - 194561 bp Length : 1278 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATAGATATAAACCTCATTAGGGAAAAACCCGATTACGTGAAGGAAAGACTCGCAACGAGGGATAAAGAACTCGTTTC CTTAGTTGACAAAGTTCTTGAACTTGACAAAAGGAGAAGGGAAATAATAAAAAGACTTGAAGCCTTAAGGAGTGAGAGGA ATAAACTGAGCAAGGAAATAGGAAAACTAAAGAGGGAAGGCAAGGACACCACGGAAATACAAAACAGAGTAAAGGAATTG AAAGAGGAAATAGACAGACTTGAGGAAGAGTTAAGGAAAGTGGAAGAGGAGTTAAAGAACACGCTCCTCTGGATACCTAA CCTCCCCCACCCGAGTGTTCCAGTGGGAGAGGACGAAAAGGACAACGTGGAAGTAAGGAGATGGGGAGAGCCGAGGAAGT TTGATTTTGAACCAAAACCTCACTGGGAAATAGGGGAAAGATTGGGAATTCTCGACTTCAAGAGGGGTGCAAAGCTCTCT GGAAGCAGGTTTACCGTAATAGCCGGCTGGGGTGCGAGATTAGAAAGGGCGCTTATAAACTTTATGCTGGACCTCCACAC CAAAAAGGGCTACAAGGAAATATGTCCTCCCCATTTGGTAAAGCCGGAAATCTTAATAGGAACTGGACAGCTACCGAAGT TTGAAGAGGACCTCTACAAGTGTGAAAGGGATAACCTCTACCTGATACCCACCGCGGAAGTTCCCCTGACAAACCTCTAC AGAGAAGAGATACTCAAGGAAGAGAACCTTCCCATATATCTCACTGCGTACACGCCCTGTTACAGAAGGGAAGCGGGAGC ATACGGAAAAGACATAAGGGGGATAATAAGACAGCACCAGTTTGACAAAGTAGAACTTGTGAAGATAGTCCACCCGGACA CTTCTTACGATGAGCTTGAGAAACTTGTAAAAGACGCTGAAGAAGTTCTCCAGCTTCTCGGACTTCCATACAGGGTGGTG GAACTCTGCACGGGTGACCTCGGTTTTTCCGCCGCAAAGACCTACGACATAGAAGTGTGGTTTCCCTCTCAAAACAAGTA CAGGGAAATCTCCTCCTGCTCCAACTGCGAGGACTTTCAAGCGAGGAGGATGAACACGCGCTTTAAGGACTCAAAAACTG GTAAAAATAGGTTCGTACACACTCTGAACGGCTCCGGACTTGCGGTGGGAAGGACTCTGGCGGCTATATTGGAAAACTAC CAACAGGAAGACGGTAGCGTAGTAGTTCCGGAAGTTCTCAGAGATTACGTGGGAACGGACGTGATTAGACCCGAGTAA Protein sequence : MIDINLIREKPDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLSKEIGKLKREGKDTTEIQNRVKEL KEEIDRLEEELRKVEEELKNTLLWIPNLPHPSVPVGEDEKDNVEVRRWGEPRKFDFEPKPHWEIGERLGILDFKRGAKLS GSRFTVIAGWGARLERALINFMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCERDNLYLIPTAEVPLTNLY REEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDTSYDELEKLVKDAEEVLQLLGLPYRVV ELCTGDLGFSAAKTYDIEVWFPSQNKYREISSCSNCEDFQARRMNTRFKDSKTGKNRFVHTLNGSGLAVGRTLAAILENY QQEDGSVVVPEVLRDYVGTDVIRPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-109 | 56 |
