Gene Information

Name : ntrC3 (aq_230)
Accession : NP_213156.1
Strain : Aquifex aeolicus VF5
Genome accession: NC_000918
Putative virulence/resistance : Resistance
Product : NtrC family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 141804 - 143150 bp
Length : 1347 bp
Strand : +
Note : -

DNA sequence :
ATGATTCTTTTGGTTGAAGATGACGACAACTTAAGGGAACTCCTTAAGAAAAAACTCGAAGAACACTTCGTGGTAGAAAC
TGCAAAAGACGGAAAGACGGCAAGGGAGAAGTTAAGTAAAAATAACTACGACGTTGTTCTCCTCGATATAAGACTTCCCG
ACGTAGACGGAACAGAACTTTTGAAAGAGTTTTCAACGAGCGGGGTTAAGTTCATAGTGATTACCGGCTACGGAGACGTA
AAAACGGCCGTCCAATGTGTAAAACTGGGAGCCTACGACTTTATCCAAAAACCTTTTAACTTTGAACTACTGGAAGTAAC
TATAAGAAGGGCACTTAAAGAGAAAAGACTGGAGGAGGAAAACAGGACGTTAAAGAGCTTCCTCTTTAAGGAAAAGGAAG
AAGATTACCTGCTGGAAACCAGAAGTCCAAAGTTCAGGGAAGTTTTAGAAATAGCGAGGAGGATTGCAAATACAGACCTT
CCCGTGCTCATACGCGGAGAGACGGGAGTGGGGAAGGAAGTTCTTGCTAAATATATACACACTATTTCAAATAGGAAGGA
CAAACCTTTCGTGGTAGTGGATTGCACCTCTATACCCGAGCACCTCTTTGAGAGCGAACTCTTTGGATACGAAAAGGGAG
CCTTTACGGGGGCAAATACTAGAAAACTAGGACTTGTTGAACTCGCAAATGGCGGAACGCTCTTTTTTGACGAAATAGGA
GAAATGCCTCTCTCAATTCAAGCAAAGCTCCTGAGATTTATAGAAACTAGAAAGTTTAGAAGGGTAGGAGGTTTAAAGGA
TCTAGAAGTAGATGTCAAAATAATTTGCGCTACGAATAAGGATTTATACGAGAAGTCAAAGAGAGGAGAGTTCAGAGAAG
ACCTCTATTTTCGTATAAACACAGTGGAAATCGAAATCCCTCCTCTCAGGGAAAGAAAGGAAGACATACCCCTCCTCGTG
GAGTTTTTCCTGAAGAAATATGGGAAGAAGATCAAAAAAGAAACCTTAAACGAGCTTATAAATTACCCCTGGGAGGGAAA
CGTAAGGGAACTTAAGAACGTAATAGAGAGGGCATGCATACTCTCAACGGGTGAGTATATTGACGAGGCGATATGTCTCA
GTAAGAAAAGCGTGAGCTGTGTGGAAAAAATGATGGAAAAACTCCCAAGTCTTGAAGAGCTTGAAGGGATGTACCTCAAG
TTTCTTTACGAAAAACTGGAAGGTGATGTGGACAAAATTGCCGTTATTCTCGGCTGTAGCAGGAGAACCGTCTTCAGAAA
GTTAAAGAAGTTAAGAGAGGGGAAGGTGCACTTCAAAAATGCTTCCCTTTCCGGGGGCACTCCTTAA

Protein sequence :
MILLVEDDDNLRELLKKKLEEHFVVETAKDGKTAREKLSKNNYDVVLLDIRLPDVDGTELLKEFSTSGVKFIVITGYGDV
KTAVQCVKLGAYDFIQKPFNFELLEVTIRRALKEKRLEEENRTLKSFLFKEKEEDYLLETRSPKFREVLEIARRIANTDL
PVLIRGETGVGKEVLAKYIHTISNRKDKPFVVVDCTSIPEHLFESELFGYEKGAFTGANTRKLGLVELANGGTLFFDEIG
EMPLSIQAKLLRFIETRKFRRVGGLKDLEVDVKIICATNKDLYEKSKRGEFREDLYFRINTVEIEIPPLRERKEDIPLLV
EFFLKKYGKKIKKETLNELINYPWEGNVRELKNVIERACILSTGEYIDEAICLSKKSVSCVEKMMEKLPSLEELEGMYLK
FLYEKLEGDVDKIAVILGCSRRTVFRKLKKLREGKVHFKNASLSGGTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 6e-52 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 6e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ntrC3 NP_213156.1 NtrC family transcriptional regulator BAC0022 Protein 3e-49 41