Gene Information

Name : ribD1 (aq_138)
Accession : NP_213094.1
Strain : Aquifex aeolicus VF5
Genome accession: NC_000918
Putative virulence/resistance : Unknown
Product : riboflavin specific deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 85418 - 86488 bp
Length : 1071 bp
Strand : -
Note : -

DNA sequence :
ATGATAAGAGAAATAGACAAAAACTATATGAAGTTGGCACTCTCTCTGGCTAAGAAGAGAAAAGGCTACACTCATCCAAA
TCCTACGGTGGGAGCGGTTGTCGTAAAGGAAGGAAAAATCGTGGGATTAGGTTATCACGAAAAAGCAGGAAAGCCTCACG
CTGAAGTTATGGCTCTCGGTCAGGCGGGGGAAAAAGCAAAAGGGGCAACCCTTTACGTTACCCTTGAGCCGTGTACTCAC
TTCGGGAGAACTCCTCCCTGCACGGACGCGATAATAAGGAGCGGGATTAAAAGGGTTGTAGTGGCAACGCTTGACCCAAA
TCCTTTGATGTCTGGAAAAGGTGTTGAAAAACTGAGAAATGCGGGAATAGAAGTGGATGTCGGTGTATGCGAAGAGGAGG
CCAGAGAACTCAACGAAGATTTTTTTACTTACATAACTCAGGAAAGACCTTACATAACGCTAAAATGGGCCCAGACCCTG
GACGGAAAACTCGCGACCCTCACGGGAAGCAGTAAGTGGATAACCTCAAAGGAAAGCAGAAAGGTAGCTCACATCTTAAG
GAGAGAGGCAACTGCGGTTCTGGTAGGTGTAAACACAGTCATAAAAGACGACCCACACTTAACGGTCAGGTTTGTTCCAA
CGGAAAAACAACCTGTAAGGATAATTCTGGACCCTGAACTTGAAGTTCCACTGAGTGCTAAAGTTCTGAATACGGAAGAA
GCTCCAACAATTGTTATAACGAAAAAGGAGAATGAAAAAGCTGAAAAACTCAAAGAAAAAGGAGTTCAGGTTTTAATCCT
CAAAGGCTTTAACCTGAAAAATATCCTTAAAAAACTCAAAGAGCTTGAAATTATGCACCTCATGGTGGAGGGTGGTCCAA
GAACGCTGACGAGTTTCTTAAAGGAGGGTTTCTTTGACCGCATAGTTGTGTTTATCGCACCCAAAATTATGGGGGAGGGC
TTGAGTATAGGTGACCTCGGGATAAGAAGTATAGAAGAAAGTTTAAAAGTGAGAAAGAAAAAAGTGGAAAACTTGGGGGA
GGATTTAGTTATTTTCTTTAAAAGGTATTAA

Protein sequence :
MIREIDKNYMKLALSLAKKRKGYTHPNPTVGAVVVKEGKIVGLGYHEKAGKPHAEVMALGQAGEKAKGATLYVTLEPCTH
FGRTPPCTDAIIRSGIKRVVVATLDPNPLMSGKGVEKLRNAGIEVDVGVCEEEARELNEDFFTYITQERPYITLKWAQTL
DGKLATLTGSSKWITSKESRKVAHILRREATAVLVGVNTVIKDDPHLTVRFVPTEKQPVRIILDPELEVPLSAKVLNTEE
APTIVITKKENEKAEKLKEKGVQVLILKGFNLKNILKKLKELEIMHLMVEGGPRTLTSFLKEGFFDRIVVFIAPKIMGEG
LSIGDLGIRSIEESLKVRKKKVENLGEDLVIFFKRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-50 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-50 42