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Name : gspE (aq_1474) Accession : NP_214017.1 Strain : Aquifex aeolicus VF5 Genome accession: NC_000918 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1051345 - 1052754 bp Length : 1410 bp Strand : + Note : - DNA sequence : ATGTCCGAATTGAGTGAAAGCTTTGAGTACATAGTAGAAGAAGAAAACGAGAGGGAACTCCTCGTAATCGTCCCTCAAAA TTACAACTTTTTTGCAGTTGAGGAACTGAGATTTAAGAAGGGGAAGGACGTAAAACTAAAAGTTTTGAGCGAAGAGGAAT ACGCAAAGCTCATTCAGGACAGGATTTCCGGGGAAAACGTAGTACTTGAAGAGGAAGAAGAGAGGGAAGAAAAGAGCGAG GACATACTCTTCCAGAGGGACACATCACCTGCCGTAAGGCTGGTGAACACTGTTCTCATAAAAGCCTCTTCCGTTAACGC CTCGGATGTCCACTTTGAACCTTACGAGGACGAAGCGGTAGTCAGGATAAGGATGGACGGAGTTCTCCACGACTATACTA AGGTATCGCCTTCCCTCTATCAGGAAGTGGTATCCCGCATAAAAGTTATGGCAAAACTGAACGTTGCGGAAAAGAGGATA CCGCAGGACGGCAAAATAAGGGTGAAGATAGGAAAGAGGGACTACGATATCAGAGTTTCCGTAGTGCCGACCGTTTTTGG GGAAAGGGTAGTTCTGAGACTCCTTGAAAAGACTGGACAACTTTTAACACTCTCAGACCTCGGTTTATCGAAAGGAGACG AAGAAAAGGTGAGAAGACTCGCGGAAAAGCCTTACGGAATAGTTCTCGTGACTGGTCCGACAGGTGCCGGAAAGTCCACT ACTCTTTACGCTATGCTCCTTCACGTGAAAAACCCAAAGAAGAACATAATAACCATAGAAGATCCCGTGGAGTATCAGGT AAAAGGGATAAGCCAGATTCAGGTAAACCCGAAAGTCGGACTCACCTTTGCACAGGGACTCAGGGCAATCCTGAGGCAGG ATCCAGACGTCATAATGGTGGGAGAGATAAGGGACCCAGAGACGGCGGAGGTAGCAGTTCAGGCGGCATTAACGGGGCAC TTAGTTTTATCGACCCTTCACACAAACGACGCACCTTCTGCAATTACGAGGTTAAAAGACCTAGGTATAGAACCTTTCCT CATAGCCTCTTCCCTCGAAGGAGTTATAGCCCAAAGGCTTGTGAGAAAGATATGCAATAACTGCAAAGAGCCCTACAAAC CCTCTAAGGAAGAAATAAGAGAACTGGGTCTTCCCGAGGAAGATTACACCTTCTACAGAGGAAGAGGTTGCGAACATTGC CTCGGAACTGGCTACAGGGGTAGAACCGGAATTTTTGAAGTACTAGAAGTGGATGAAGATATGAAGAAATTGATAAACGA AACTCAGGATTCTGTAAAAATAAGGCAATTTGCGAGGAAGAAGGGGTATAAAACTATGCTCGAAGATGGTATAGAAAAGA TACTGAAAGGTATCACTACGAGCAGTGAAGTGCTGAGCGTTGTTAAGTGA Protein sequence : MSELSESFEYIVEEENERELLVIVPQNYNFFAVEELRFKKGKDVKLKVLSEEEYAKLIQDRISGENVVLEEEEEREEKSE DILFQRDTSPAVRLVNTVLIKASSVNASDVHFEPYEDEAVVRIRMDGVLHDYTKVSPSLYQEVVSRIKVMAKLNVAEKRI PQDGKIRVKIGKRDYDIRVSVVPTVFGERVVLRLLEKTGQLLTLSDLGLSKGDEEKVRRLAEKPYGIVLVTGPTGAGKST TLYAMLLHVKNPKKNIITIEDPVEYQVKGISQIQVNPKVGLTFAQGLRAILRQDPDVIMVGEIRDPETAEVAVQAALTGH LVLSTLHTNDAPSAITRLKDLGIEPFLIASSLEGVIAQRLVRKICNNCKEPYKPSKEEIRELGLPEEDYTFYRGRGCEHC LGTGYRGRTGIFEVLEVDEDMKKLINETQDSVKIRQFARKKGYKTMLEDGIEKILKGITTSSEVLSVVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-98 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-98 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | NP_214017.1 | general secretion pathway protein E | VFG2048 | Protein | 3e-98 | 52 |
| gspE | NP_214017.1 | general secretion pathway protein E | VFG1876 | Protein | 8e-95 | 51 |
| gspE | NP_214017.1 | general secretion pathway protein E | VFG0182 | Protein | 2e-99 | 50 |
| gspE | NP_214017.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-80 | 44 |
