Gene Information

Name : potA (AF1608)
Accession : NP_070437.1
Strain : Archaeoglobus fulgidus DSM 4304
Genome accession: NC_000917
Putative virulence/resistance : Resistance
Product : spermidine/putrescine ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 1443512 - 1444549 bp
Length : 1038 bp
Strand : -
Note : identified by sequence similarity

DNA sequence :
GTGGTTGGCTACGCTGTCGAACTTGAGGGCATTTCAAAGAGCTACGACAGCACTACGGTGCTCGAAGACATAAATCTCAG
GATTCAGCAGGGTGAGTTCTTCTCCCTGCTTGGCCCAAGTGGTTCCGGGAAAACCACAATCATACGGATAATTGCGGGAC
TTACCTTTCCCGATCAGGGTTTTGTGAGGATTAACGGGGAGGATTGCACCTCTTTACCGCCCTACAGGCGCAACGTCGGT
ATGGTGTTTCAGAATCTCGCCCTCTTCCCCCATCTTAACGTTTTTGAAAACGTCGCCTACGGGTTGAGGCTGAGAAAGAT
TCCCGAAGGTGAGATAAAGGATAGGGTTTACCGCTACCTCGAACTCGTCAACCTCGACCCTGAGATTTACGCAAAAAGGA
AGGTAGAGCAGCTATCTGGAGGGCAGCAGCAGAGGGTTGCAATTGCGAGGGCTCTGGTTACCGAGCCTTCCATCCTGCTC
CTCGACGAGCCGCTCGGCGCTCTGGATTTAAAGATAAGGCAGCACATGATTTCCGAACTTAAAAGAATCCAGAAGACGCT
GGGAACGACCTTCATTTACGTCACCCACGACCAGAGCGAGGCTTTGCTGCTTTCCGACAGGTTGGCCGTCCTCAATGAAG
GCAGAATCCACCAGATTGGGACGCCAAGGGAAATCTACGAGAGGCCAAAAACGAGGTTCGTCGCCTCATTCATAGGCGAA
ACCAACTTTCTGGAGGCAAGGGTCGTGAACGGAGAGGTCATCACCGAAATCGGAAAGGTGAGGGTTTTCGGCCTTGATGG
GGCGAGGGAGTTCTGCATATCCATCCGCCCTGAAAAGCTTAAAATCAACCAGCAGGCTGAGAACACCTTTGAGGCTGTCG
TTGAGGAAATTGGCTACCTCGGAAGCTTTTTGATGCTGAAGCTGAGGGCTGGCGATGTTGTAGTGAAGGCCTTCGCCCCG
CCGCAGGAAAATGTTAGGGAAGGGGAAAGGGTGATTGTTGGTTGGGATAGTAGGGATGCGGTAATCTTGGAGGCATGA

Protein sequence :
MVGYAVELEGISKSYDSTTVLEDINLRIQQGEFFSLLGPSGSGKTTIIRIIAGLTFPDQGFVRINGEDCTSLPPYRRNVG
MVFQNLALFPHLNVFENVAYGLRLRKIPEGEIKDRVYRYLELVNLDPEIYAKRKVEQLSGGQQQRVAIARALVTEPSILL
LDEPLGALDLKIRQHMISELKRIQKTLGTTFIYVTHDQSEALLLSDRLAVLNEGRIHQIGTPREIYERPKTRFVASFIGE
TNFLEARVVNGEVITEIGKVRVFGLDGAREFCISIRPEKLKINQQAENTFEAVVEEIGYLGSFLMLKLRAGDVVVKAFAP
PQENVREGERVIVGWDSRDAVILEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-28 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
potA NP_070437.1 spermidine/putrescine ABC transporter ATP-binding protein BAC0604 Protein 8e-46 43