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Name : HP0875 (HP0875) Accession : NP_207669.1 Strain : Helicobacter pylori 26695 Genome accession: NC_000915 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 925571 - 927088 bp Length : 1518 bp Strand : - Note : similar to GP:1561776 percent identity: 99.41; identified by sequence similarity DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGCGCTCCCGTTTGGGATGACAACAATGTGATTACGGCCGGCCC TAGAGGTCCTGTTTTATTACAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGACAGAGAAAGAATCCCTGAAAGGG TGGTGCATGCTAAAGGAAGCGGAGCTTATGGCACTTTCACTGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACCGAATGCTTCTTCAGATTTTCTACTGTGGCTGGTGAAAGAGGCAGTGCGGATGCGGT GAGAGACCCTAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTAGTGGGGAACAACACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTCATCCACACTCAAAAACGAGATCCTCAAACCAATTTGCCTAACCAT GACATGGTATGGGATTTTTGGAGTAATGTTCCTGAAAGCTTATACCAAGTAACATGGGTTATGAGCGATAGGGGTATTCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCACACTTTCAGTCTTATCAACGCGAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTCACACCATGCAAGGCGTTAAGCATTTGACTAACGAAGAAGCCGCAGAAGTTAGGAAGTATGATCCGGAT TCCAATCAAAGGGATTTATTCAATGCGATCGCTAGAGGGGATTTCCCAAAATGGAAATTAAGCATTCAAGTGATGCCAGA AGAAGATGCTAAGAAGTATCGATTCCATCCGTTTGATGTAACTAAAATTTGGTATCTCCAAGATTATCCATTGATGGAAG TGGGCATTGTGGAGTTGAATAAAAATCCTGAAAACTATTTCGCAGAAGTGGAACAAGCGGCATTCAGTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTACAAGGGCGCTTGTTCTCTTATGGAGACACACACCGCTACCGCTT AGGCGTTAATTATCCTCAAATACCGGTTAATAAACCAAGATGCCCATTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGATACTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCTGGCTATAAAGAAGATAAGAGCGCGAGAGATCCT AAGTTCAACTTAGCTCATATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGATGATAGCGATTACTACAC CCAACCAGGTGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGCATGACACTATTGGAGAGTCTTTAGCTC ATGTTACCCATAAGGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGGAAAAGACATGCACCACACAAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNH DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPD SNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFSPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHGKDMHHTKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 1e-134 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 6e-92 | 52 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-89 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-89 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-89 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-89 | 47 |
