|
Name : HP0822 (HP0822) Accession : NP_207615.1 Strain : Helicobacter pylori 26695 Genome accession: NC_000915 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 875188 - 876453 bp Length : 1266 bp Strand : + Note : catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGTGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATTAAAGACAGAGCCGGTGTGGGAATTGGCATTAAAAAAGCGGTGGTGCGAGATGTGAAAAAGCACAAAGGCT ATCCTTTTGAAATCAGTAATGATTTAGAAAGCCTGATAGAAGATGAAGAAATTGATATTGTCGTGGAGCTTATGGGTGGG GTGGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCGTTACAGCCAATAAAGCCATGTTGGC GTATCACCGCTATGAATTAGAGCAAACCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGTGGGGGTATCCCTA TTATCAAAGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACGAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCGCAACATTTAGGCTATGCGGAATT GAACCCTGAATTTGACATTAAGGGCATTGATGCGGCGCACAAATTGTTGATTTTAGCGTCTTTAGCGTATGGCATTGATG CGAAATTAGAAGAAATCTTGATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAATTTGCAAAAGAATTTGGTTAT AGCATTAAACTTTTAGGCATCGCTAAAAAACACCCAGATTGTATTGAATTAAGAGTGCATCCAAGCATGATTAAAAACGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATCAGCGTCATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA ATGCTGGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGCTTGTT AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATCAGCGCGATTTTAGCTCAAAATGATATTTCGCTCAACAATGTCTTGC AAAAAGAAATCTTGCATTCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAGTCTATGCTGAACGCC CTTAAAGAGCTTGAAAATTTACAAAGCGTGTTGGATACCCCCAAGATGATTCGTTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVGIGIKKAVVRDVKKHKGYPFEISNDLESLIEDEEIDIVVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQTAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHPDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEILHSNKAKILFSTHTTNEKSMLNA LKELENLQSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 3e-62 | 41 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 3e-62 | 41 |
