|
Name : fliP (HP0685) Accession : NP_207479.1 Strain : Helicobacter pylori 26695 Genome accession: NC_000915 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 734342 - 734803 bp Length : 462 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : TTGATATTGACTTTTTTCATCATGGAACCTAGCCTAAAAAAGGCCTATGATACAGGGATTAAGCCTTATATGGATAAAAA GATTTCTTACACCGAAGCGTTTGAAAAAAGCGCTCTGCCCTTCAAGGAATTCATGCTTAAAAACACACGAGAAAAGGATC TAGCCCTTTTTTTTAGGATTAGAAACCTCCCTAACCCTAAAACCCCTGATGAGGTGAGTTTGAGCGTTTTGATCCCGGCA TTTATGATAAGCGAGTTGAAAACAGCGTTTCAAATCGGCTTTTTACTCTACTTGCCTTTTTTGGTGATTGATATGGTGAT CAGCTCTATTTTAATGGCGATGGGCATGATGATGCTCCCGCCTGTAATGATTTCTCTGCCTTTTAAAATTTTAGTGTTTA TTCTGGTAGATGGGTTTAATTTATTGACCGAAAATTTAGTGGCGAGTTTTAAAATGGTTTGA Protein sequence : MILTFFIMEPSLKKAYDTGIKPYMDKKISYTEAFEKSALPFKEFMLKNTREKDLALFFRIRNLPNPKTPDEVSLSVLIPA FMISELKTAFQIGFLLYLPFLVIDMVISSILMAMGMMMLPPVMISLPFKILVFILVDGFNLLTENLVASFKMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 1e-16 | 42 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-16 | 42 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-16 | 42 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-16 | 42 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 7e-17 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 3e-14 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | NP_207479.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 3e-17 | 42 |
