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Name : HP0540 (HP0540) Accession : NP_207336.1 Strain : Helicobacter pylori 26695 Genome accession: NC_000915 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein (cag19) Function : - COG functional category : - COG ID : - EC number : - Position : 571580 - 572725 bp Length : 1146 bp Strand : - Note : similar to GP:1752692 percent identity: 99.48; identified by sequence similarity DNA sequence : GTGAAATGTTTTTTAAGCATATTTTCTTTCTTGACTTTTTGTGGTTTGTCTCTGAATGGCACAGAAGTAGTAATAACGCT TGAACCCGCCTTAAAAGCCATTCAGGCGGACGCACAAGCCAAACAAAAAACCGCTCAAGCTGAATTAAAAGCCATAGAAG CTCAGTCTAGTGCCAAAGAAAAAGCCATTCAAGCGCAAATAGAGGGAGAATTGAGGACTCAGCTTGCAACCATGAGTGCT ATGTTAAAAGGGGCTAATGGCGTTATTAATGGTGTCAATGGCATGACAGGGGGGTTTTTTGCAGGTTCAGACATCTTGCT TGGCGTCATGGAAGGGTATTCAAGCGCGCTTAGTGCATTGGGGGGGAATGTTAAAATGATCGTGGAAAAACAAAAAATTA ACACCCAAACAGAAATCCAAAACATGCAAATCGCGCTCCAAAAAAATAACGAAATAATCAAGCTCAAAATGAACCAGCAA AACGCTCTCTTAGAAGCGTTAAAAAATAGCTTTGAACCGAGCGTTACTCTAAAAACACAAATGGAAATGCTTTCTCAAGC TCTAGGAAGTTCTTCTGACAACGCTCAATACATCGCTTACAATACGATTGGTATCAAGGCGTTTGAAGAAACCTTAAAAG GTTTTGAAACATGGTTGAAAGTGGCTATGCAAAAAGCGACCCTTATTGATTATAATTCCCTAACGGGTCAGGCTTTGTTT CAAAGTGCCATCTATGCGCCTGCTCTTAGTTTTTTTTCAAGCATGGGTGCACCATTTGGAATCATTGAAACATTCACTCT AGCGCCCACAAAATGCCCCTATCTTGATGGGCTAAAAATTTCAGCATGCCTTATGGAACAGGTTATTCAGAATTACAGAA TGATTGTAGCCCTTATTCAAAATAAACTGAGTGATGCAGATTTTCAAAATATCGCTTATTTGAATGGGATCAATGGAGAA ATCAAAACCTTAAAAGGATCAGTAGATTTGAACGCGCTCATAGAAGTTGCTATCTTAAACGCAGAAAATCATTTAAACTA TATAGAGAATCTTGAAAAAAAAGCCGACCTTTGGGAAGAACAACTGAAATTAGAAAGAGAAACGACAGCAAGAAACATTG CTAGCTCTAAAGTTATTGTCAAATGA Protein sequence : MKCFLSIFSFLTFCGLSLNGTEVVITLEPALKAIQADAQAKQKTAQAELKAIEAQSSAKEKAIQAQIEGELRTQLATMSA MLKGANGVINGVNGMTGGFFAGSDILLGVMEGYSSALSALGGNVKMIVEKQKINTQTEIQNMQIALQKNNEIIKLKMNQQ NALLEALKNSFEPSVTLKTQMEMLSQALGSSSDNAQYIAYNTIGIKAFEETLKGFETWLKVAMQKATLIDYNSLTGQALF QSAIYAPALSFFSSMGAPFGIIETFTLAPTKCPYLDGLKISACLMEQVIQNYRMIVALIQNKLSDADFQNIAYLNGINGE IKTLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEEQLKLERETTARNIASSKVIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0540 | NP_207336.1 | cag pathogenicity island protein (cag19) | Virulence | cag PAI | Protein | 9e-162 | 100 |
| cagI | AGC69802.1 | cag pathogenicity island protein I | Virulence | cag PAI | Protein | 4e-161 | 99 |
| cagI | YP_003728724.1 | cag pathogenicity island protein I | Virulence | cag PAI | Protein | 2e-161 | 99 |
| cagI | AAF80208.1 | CagI | Virulence | cag PAI | Protein | 3e-161 | 99 |
| cag19 | AAR03963.1 | Cag19 | Virulence | cag PAI | Protein | 3e-161 | 99 |
| cag19 | AAR03902.1 | Cag19 | Virulence | cag PAI | Protein | 4e-160 | 99 |
| cag19 | AAR03874.1 | Cag19 | Virulence | cag PAI | Protein | 1e-160 | 99 |
| HP0540 | BAD14038.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-161 | 99 |
| cagI | NP_223206.1 | cag island protein | Virulence | cag PAI | Protein | 7e-160 | 99 |
| HP0540 | BAD13873.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-161 | 99 |
| cagI | YP_005775740.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-161 | 99 |
| HP0540 | BAD13983.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-156 | 98 |
| HP0540 | BAD13928.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-158 | 98 |
| HP0540 | BAD13956.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-159 | 98 |
| cag19 | AAR03932.1 | Cag19 | Virulence | cag PAI | Protein | 7e-160 | 98 |
| cagI | YP_005777281.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-156 | 97 |
| HP0540 | BAD13901.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-155 | 96 |
| cagI | YP_005774531.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-149 | 96 |
| HP0540 | BAD13819.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-155 | 96 |
| cagI | YP_005779053.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-155 | 96 |
| HP0540 | BAD14065.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-155 | 96 |
| HP0540 | BAD13846.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-155 | 96 |
| HP0540 | BAD13792.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 9e-156 | 96 |
| HP0540 | BAD14011.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-155 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HP0540 | NP_207336.1 | cag pathogenicity island protein (cag19) | VFG0299 | Protein | 4e-162 | 100 |
