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Name : HP0439 (HP0439) Accession : NP_207237.1 Strain : Helicobacter pylori 26695 Genome accession: NC_000915 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3736 EC number : - Position : 456080 - 457180 bp Length : 1101 bp Strand : - Note : hypothetical protein; identified by GeneMark DNA sequence : ATGTCAAAAAGAAGCGAAGTTTTAGAACAATTTCATGGCGGTTTAAAAAATTTAGAATTACAAACTAAAAGACGCATGGG TTTGTGGGGCGATCCAAAAGAGAATGAAGAACAAACTTTGTTTTTAGAAGAAATTGAAAATGAATTAAAGCAATTAGAAA ACAAAGAAAATCTTAAAGCAGACAACAACACAGAATTTAAAGAAGAAAATCAAGACACTAAAGAAAACCAGCCTAACGAT TTGTTTTCTTTGCCATTGCCCACTCAAACCACCATCAATGGAATTAAAGAATTTGTAGAAGAGCCTGTGATAGAAACAGA GAAAAAAGAAACATCCCAAAATGAGCCAATCCAAGAAAAAAAAGAAAGAATTTTTAAAAACTTTTTCTCCAGAATAGGCT TTGATAAAAGTATTGCCCCTACAATGCTTTTTGAAGAAGTGAGAGATGCAAGCGTTATCTATCATTTAGAGAAAAAATTA GGCGATTATATCTTTTATGTAGCGTGTTTCTTCTTTGGCACAACGGCATTGCTTATTATCTTACTGACTATTCTGTTGCC CTTAAAACAAAAAGAGCCGTATTTAGTGCAATTTTCTAACAATAAAGAAAATTTTGCTTTAGTTCAAAAGGCAGATAGCA GCATTACAGCCAATAAAGCTCTTATTCGTTCATTAGTGGGAGCGTATGTGCTAAACAGGGAAAGCATTACTCATATTGAG CAACATGAAAAAATGCGTCAAAACACCATTAAAGAGCAAAGTTCCAATGAAGTATGGTATGAATTTGAAAAACTCATCGC TCATTATGACAGCATTTACACTAATCCTTTACTCACAAGAAAAGTAAAGATTGCAAATATTTACTTAGATAAAGATTTAG CCTATATTGACATTGAAGTGAGCTTGTATCATAGTGGAGAATTAGAGAGCTTGAAGCGCTATAAAGTGGTGATGAGTTTT GAATTTAAAAAACAAGAAATCAATTTTGACTCCATGTCTTTAAATCCTACAGGCTTTATGGTTACAAGTTATGATGTAAC TGAAATTGCGATTGTGAATTACCCAACCGCTAAAGCGATTGGGCTTTTTCTTGCTTCATAG Protein sequence : MSKRSEVLEQFHGGLKNLELQTKRRMGLWGDPKENEEQTLFLEEIENELKQLENKENLKADNNTEFKEENQDTKENQPND LFSLPLPTQTTINGIKEFVEEPVIETEKKETSQNEPIQEKKERIFKNFFSRIGFDKSIAPTMLFEEVRDASVIYHLEKKL GDYIFYVACFFFGTTALLIILLTILLPLKQKEPYLVQFSNNKENFALVQKADSSITANKALIRSLVGAYVLNRESITHIE QHEKMRQNTIKEQSSNEVWYEFEKLIAHYDSIYTNPLLTRKVKIANIYLDKDLAYIDIEVSLYHSGELESLKRYKVVMSF EFKKQEINFDSMSLNPTGFMVTSYDVTEIAIVNYPTAKAIGLFLAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB8-1 | YP_002301100.1 | VirB8 type IV secretion protein | Virulence | cag PAI | Protein | 8e-139 | 96 |
