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Name : HP1008 (HP1008) Accession : NP_207798.1 Strain : Helicobacter pylori 26695 Genome accession: NC_000915 Putative virulence/resistance : Unknown Product : IS200 insertion sequence from SARA17 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 1069967 - 1070383 bp Length : 417 bp Strand : + Note : similar to GB:L25848 GB:X52093 PID:1177217 PID:439619 PID:1150644 percent identity: 33.91; identified by sequence similarity DNA sequence : ATGAAAAAAATTGATGATATGAGACACGGAAGACATTGTGTTTTTTTAATGCATGTGCATTTTGTATTTGTTACTAAATA CAGGCGTTCAGCATTCAATAAGGAAGTGATAGATTTTTTAGGATCGGTGTTTGCCAAAGTGTGTAAGGACTTTGAGAGCG AATTGGTAGAATTTGATGGGGAGAGCGATCATGTGCATTTGCTTATCAACTACCCTCCAAAAGTGAGCGTGAGTAAGTTA GTTAATTCTTTAAAAGGCGTTAGCAGTCGTTTGACTAGACAACACCATTTCAAAAGCGTTGAAGCTAGTTTGTGGGGGAA GCATTTATGGTCGCCTAGTTATTTCGCTGGGAGTTGTGGGGACGCGCCTTTAGAGATGATTAAGCAATACATACAAGATC AAGAAACACCGCATTAA Protein sequence : MKKIDDMRHGRHCVFLMHVHFVFVTKYRRSAFNKEVIDFLGSVFAKVCKDFESELVEFDGESDHVHLLINYPPKVSVSKL VNSLKGVSSRLTRQHHFKSVEASLWGKHLWSPSYFAGSCGDAPLEMIKQYIQDQETPH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | AAR03856.1 | transposase A-like protien | Not tested | cag PAI | Protein | 8e-62 | 98 |
| tnpB | CAJ31328.1 | insertion sequence IS606 transposase homolog B | Not tested | cag PAI | Protein | 4e-60 | 95 |
