|
Name : HP0995 (HP0995) Accession : NP_207786.1 Strain : Helicobacter pylori 26695 Genome accession: NC_000915 Putative virulence/resistance : Unknown Product : integrase/recombinase (xerD) Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1056158 - 1057225 bp Length : 1068 bp Strand : - Note : similar to GB:M54884 SP:P21891 PID:147548 PID:887844 GB:U00096 percent identity: 27.75; identified by sequence similarity DNA sequence : ATGCCACATAACAAACTCACTAAATCTCAGAGAGAACTCTTTTGTAATCTCAAAGCCTTTTTATACACTAAGGCTAAAAA CTTCACGCCCATTCAAGATGTGAAGGATATGGCTTTAATCCTAGACACACAAGATAAAATCTTAAAATGTCATAATATAG AGCAATTAAAACAACTCTGTCATATTCTTTATAATCAAGGCATTAAACACACTATAATGATGCAAGGCTTGTTTTTATTC TTTAACTATTTTAAAGATAATCTCAAATTAAGAAGTTTTAGAATGCTTAGCGAAGAGCAAGTGATTAACTTTCTCTTTGA ACTCGCTCAAAATAGAAAACCCAGCTCTATGGCTAAGTATGTGATGTATTTAAGACAATTCTTTGATTATTTGGATAGAA AAAGGCGTTATAGCTTTGATTTTACGCTTAAAAACCTAGCCTTTGCTAAGACCAAAGAAAGCTTACCCAGACATTTAAAC GATAAAGACTTAAAGAGTTTTTTAAAAACACTCTTAGACTATAAGCCAGCTACAAGCTTTGAAAAACGCAATAAGTGTAT TCTACTTATTGTAATACTTGGTGGACTTAGAAAATGCGAAGTGTTAAACATAGAATTAAAACACATTCAAGTAGAAGAGC AAAACTACTCTATTTTAATTCAAGGTAAAGGTAGAAAAGAGAGAAAAGCTTATATTAAAAAGAGTTTGTTAGAACCAAGC TTGAATGCTTGGCTTAGTGATGAATATAGACTAAAATATTTTAATGGGGCATATCTTTTTAAAAAAGACAAACAAAAAGC ACAAAATTCTTTAACGCTTTATAGCTTTATCCCCTTAATCTTTAAACTAGCTCAAATCAAACACTATAAGCAATATGGCA CAGGCTTACATCTATTTAGGCATAGTTTTGCAACACTCATTTATCAAGAAACCCAAGACTTAGTTTTAACTTCAAGGGCG TTAGGGCATAGCTCCTTACTCTCTACTAAGATTTATATTCATACTACACAAGAGCATAACAAGAAAGTGGCTCTTGTGTT TGATAGTTTGATAGAGGACAAGAAGTAA Protein sequence : MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLCHILYNQGIKHTIMMQGLFLF FNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKYVMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLN DKDLKSFLKTLLDYKPATSFEKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS LNAWLSDEYRLKYFNGAYLFKKDKQKAQNSLTLYSFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVFDSLIEDKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 7e-101 | 63 |
