Gene Information

Name : NGR_a03350 (NGR_a03350)
Accession : NP_443891.1
Strain :
Genome accession: NC_000914
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 427713 - 428060 bp
Length : 348 bp
Strand : -
Note : y4hO; NGR234_144

DNA sequence :
ATGCTTCCTTCCGGTCAAAATGTGCGGGTGTGGATTGCAACGGGCCATACGGACATGCGGTGTGGGTTTCCATCGCTTGC
GTTGCGGGTGCAGGAGGTGCTGAAACTGAACCCTTTGGACGGCAATCTTTTTGTGTTTCGCGGTCGCAGCGGATCGCTGC
TAAAAGTGATCTGGAGTGACGGCCAGGGGAGCTGCCTTTTTACAAAAAGATTGGACCGTGGCCGGTTCGTCTGGCCTTCT
GCCGAAGGCGGAGCGATAGCGATATCACCCGCGCAGCTCAGTTATCTTCTGTCCGGAATCGACTGGAGGCATCCTCAGGA
AACCTGGCGGCCGACGAAGGTCGGCTAG

Protein sequence :
MLPSGQNVRVWIATGHTDMRCGFPSLALRVQEVLKLNPLDGNLFVFRGRSGSLLKVIWSDGQGSCLFTKRLDRGRFVWPS
AEGGAIAISPAQLSYLLSGIDWRHPQETWRPTKVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-27 59
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 2e-29 55
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 2e-29 55
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 5e-29 55
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 5e-29 55
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-29 55
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 3e-20 54
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 3e-26 54
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 6e-27 54
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 3e-26 54
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-27 54
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 8e-27 54
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 8e-27 54
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 8e-27 54
unnamed AAC31493.1 L0014 Not tested LEE Protein 6e-27 54
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-27 54
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 6e-27 54
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 3e-27 54
unnamed AAL99258.1 unknown Not tested LEE Protein 6e-27 54
unnamed AAL08461.1 unknown Not tested SRL Protein 1e-26 53
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 3e-24 45
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 3e-24 45
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-25 45
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 2e-25 45
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 2e-25 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NGR_a03350 NP_443891.1 transposase VFG1665 Protein 2e-29 55
NGR_a03350 NP_443891.1 transposase VFG1517 Protein 1e-20 54
NGR_a03350 NP_443891.1 transposase VFG1709 Protein 2e-27 54
NGR_a03350 NP_443891.1 transposase VFG0792 Protein 2e-27 54
NGR_a03350 NP_443891.1 transposase VFG1698 Protein 8e-28 54
NGR_a03350 NP_443891.1 transposase VFG1052 Protein 4e-27 53
NGR_a03350 NP_443891.1 transposase VFG1737 Protein 6e-26 45