Gene Information

Name : NGR_a00180 (NGR_a00180)
Accession : NP_443789.1
Strain :
Genome accession: NC_000914
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 22741 - 24291 bp
Length : 1551 bp
Strand : -
Note : y4bL; NGR234_32

DNA sequence :
ATGCCGAGACGGAAGCAAGCAAGACGAACGACAGTGAGGGATATCCGGACTATTCTGCGCCTGACCCATGAAGAGGGTCT
TTCGGTGCGCGAGATTGCCGAGCGGCTGAAGATCGGCAAGAGCTCGGTATCGACCTATTTGCTGCGATCTCGGGAAGCCG
GGCTTTCGTGGCCGTTGCCAATCGGCGCGGACGAGGATGCAAAGCTGGAGCGGCGGCTGTTCGGCCGAGCCGGTCGACCG
CCGCGCGATCTCAGCGAGCCGGACTGGGCGCTGGTGGTTCGGGAGCTGAAGCGCAAAGGCGTGACGCTGACGCTTCTATG
GCAGGAATACCGCGCCAGCCATCCTGATGGTTACGGCTTCACCTGGTTCTGCGAGCAGGTTGCCGCCTTTCGGCAGCGCA
CCAGTGTAGCGTTCCGCAATCGGCACGCGGCGGGCGCCGTGATGCAGACCGACTATGCCGGGCCGACGGTGCCGGTGATC
GATCCGGCAACCGGTGTCATCCATCCGGCCCAAATCTTTGTCGCGGTGCTGGGCGCCTCCAACCTGACCTTCGCCCATGC
CAGCTTTAGCCAGCAGTTGCCGGATTGGATCGACGGTCAGGTGCGTGCTCTGACCTTCTATGGTGGGGTCACCAAGGCAA
TCGTGTGCGACAACCTCAAATCGGGGGTGGCCAAGGCCCTTTGGTTCGAGCCGACATTGACTGCGACGTTCGCCGCCATG
GCGGAGCATTACGACACCACGATCCTGCCGACCCGCAGCAGGAAACCGCGCGACAAAGGCCGGGTCGAAGGCGCGGTATT
GATCGTGGAACGCTGGATTCTGGCCCGGCTCAGGAACCGTACCTTCTTCTCGCTTGCCGCCCTCAACACGGCGATTGCCG
AATTGCTCGAGGACCTGAACAACCGGACGATGCGCCATGTCGGCAAAAGCCGCCGCGAGCTGTTCGAGGAGATCGAGCGG
CCAGCCTTGAAGCCCTTGCCGGCGATACCGTTCGAATATGCGGAATGGAAGTCGGCGAAGGTCCATCCGGACTATCATGT
CGAGGTCGACAAGACCTTCTACTCGGTGCCGCATCGGCTGATCGGATGCACCCTCCAGGTGCGGCTCACCCACCGGGTGG
TCGAGATCTTCCACGACCACCAGCGTGTCGCCAGCCATGTTCGCCGCTCCCAGCGTTCCGGCCACGTCACCGTCAACGAC
CATATGCCCAAGGCGCATCAGCGCTATGCCAACACCACGCCGGCCAATCTGATCGGCCGTGCGACCCAGATCGGCCCCAA
TGCCGCCATCCTGGTCGAACGCATGATGCGCGACAGGCCGCATCCGGAACAGGGATACCGCTCGGCCATGGGCATTCTGT
CGCTGGCGCCGCGCTATGGATCCCAGCGCCTCGAGGCGGCCTGTGAGCGGGCGCTCACCATTAATGCCATCACCTATTCC
TCCGTCGCCTCCATCCTCAAATCCGGCCTCGACCGGGAAAGACCGCAGGCTGAACACGCGGCCCCCACGCCTGCGCATAC
CAATATCCGTGGCCGATCCTACTACCAGTGA

Protein sequence :
MPRRKQARRTTVRDIRTILRLTHEEGLSVREIAERLKIGKSSVSTYLLRSREAGLSWPLPIGADEDAKLERRLFGRAGRP
PRDLSEPDWALVVRELKRKGVTLTLLWQEYRASHPDGYGFTWFCEQVAAFRQRTSVAFRNRHAAGAVMQTDYAGPTVPVI
DPATGVIHPAQIFVAVLGASNLTFAHASFSQQLPDWIDGQVRALTFYGGVTKAIVCDNLKSGVAKALWFEPTLTATFAAM
AEHYDTTILPTRSRKPRDKGRVEGAVLIVERWILARLRNRTFFSLAALNTAIAELLEDLNNRTMRHVGKSRRELFEEIER
PALKPLPAIPFEYAEWKSAKVHPDYHVEVDKTFYSVPHRLIGCTLQVRLTHRVVEIFHDHQRVASHVRRSQRSGHVTVND
HMPKAHQRYANTTPANLIGRATQIGPNAAILVERMMRDRPHPEQGYRSAMGILSLAPRYGSQRLEAACERALTINAITYS
SVASILKSGLDRERPQAEHAAPTPAHTNIRGRSYYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 1e-100 45
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 2e-100 45
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 1e-100 45
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 3e-103 41