Gene Information

Name : yafX (b0248)
Accession : NP_414782.1
Strain : Escherichia coli K12
Genome accession: NC_000913
Putative virulence/resistance : Virulence
Product : CP4-6 prophage; predicted protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 264748 - 265206 bp
Length : 459 bp
Strand : -
Note : -

DNA sequence :
ATGACAACACAGACGCAGCACGACCTCGCACCCGCTAACCAACCCGAATTTGAACTGACCGTCACGCCGGTCCCCGATGA
ACAGCGTATCGATTTCTGGCCACAGTACTTTGGCGCTATCCCGCAGTGGCTACTCCTGGAGCCGCATATCTTCGCCTGGA
TGGACCGCTTCTGTGAGGGCTACAGCGGTGGTATCTGGTCGTTCTACACCCTCAGCAATGGCGGCGCATTTATGTCCCCC
GAGCCTGACAACGATGAGACATGGCGTCTGTTTAACTGCCTGAACGGTAACGATGCCCAAATGAGTGCAGAAGCAGCAGG
TATTGCTGTCTGCCTGATTGCGTATAGCCACCATGCCTGCCGTACAGAATGTGACGCGATGACCGCACACTATTACCGCC
TGCGGGAGTATGCCATGCAACATCCAGAGGCTCACGCCATTCTGCGTATTATCGACTGA

Protein sequence :
MTTQTQHDLAPANQPEFELTVTPVPDEQRIDFWPQYFGAIPQWLLLEPHIFAWMDRFCEGYSGGIWSFYTLSNGGAFMSP
EPDNDETWRLFNCLNGNDAQMSAEAAGIAVCLIAYSHHACRTECDAMTAHYYRLREYAMQHPEAHAILRIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 1e-45 67
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 1e-46 67
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 7e-47 67
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 6e-48 67
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 4e-48 67
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-43 66
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 3e-43 66
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 3e-43 66
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 2e-43 66
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 5e-44 66
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 5e-44 66
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 3e-45 66
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-43 66
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-43 66
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-43 66
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 3e-43 66
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 5e-42 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yafX NP_414782.1 CP4-6 prophage; predicted protein VFG1527 Protein 2e-48 67
yafX NP_414782.1 CP4-6 prophage; predicted protein VFG1616 Protein 5e-47 67
yafX NP_414782.1 CP4-6 prophage; predicted protein VFG1677 Protein 1e-48 67
yafX NP_414782.1 CP4-6 prophage; predicted protein VFG0659 Protein 8e-44 66