Gene Information

Name : intZ (b2442)
Accession : NP_416937.2
Strain : Escherichia coli K12
Genome accession: NC_000913
Putative virulence/resistance : Unknown
Product : CPZ-55 prophage; predicted integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2558858 - 2560066 bp
Length : 1209 bp
Strand : +
Note : putative prophage integrase

DNA sequence : 
TTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACT
GACGCCGGGGCTGTTTTTGCTGGTGCATCCCAACGGTTCGAAATACTGGCGATTCAGGTATTGGCTGAATAAACGAGAGT
TTTTGCAGGCCATTGGAGTTTACCCGCTAATCACACTCAAAGAAGCACGCAGGCGCGCCACGGAGAGCAGATCCCTTATT
GCCAATGGAATTAACCCAGTGGAACAAGCCCGCAAGGAAAAAGCCATTGATGCGCTCAACATGGCGGCAGGATTTAAGAA
GGTGGCGGAAGACTGGTTTGCTACCAGGGTTGGAGGGTGGTCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAA
AAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAA
GAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACT
GGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGATTA
GTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTA
ACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGC
TGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACAC
GCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCTTGTCAGCCAGCGCGATACTTAAAGCGCTT
GAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAG
ATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGTCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACC
TGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAA
CCGGAATGA

Protein sequence : 
MSKTPLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLITLKEARRRATESRSLI
ANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESYAKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKK
ERTAPEQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALERAGSVQIQTAIRLLIL
TALRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPGRFMDKPLSASAILKAL
ERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKGIRGVYNQAAYLKQRRAMMQDYADAIDSILAGNGNPLE
PE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 6e-73 44
int CAC39282.1 integrase Not tested LPA Protein 2e-72 43
aec33 AAW51716.1 Int Not tested AGI-3 Protein 2e-72 43
int AAD44730.1 Int Not tested SHI-2 Protein 2e-71 43
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 7e-71 43
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 7e-71 43
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 5e-71 43
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-70 42
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-70 42
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-70 42
int ACU09430.1 integrase Not tested LEE Protein 2e-70 42
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 6e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
intZ NP_416937.2 CPZ-55 prophage; predicted integrase VFG0598 Protein 3e-71 43
intZ NP_416937.2 CPZ-55 prophage; predicted integrase VFG0783 Protein 1e-70 42