Name : gspE (slr0063) Accession : NP_442222.1 Strain : Synechocystis sp. PCC 6803 Genome accession: NC_000911 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2589851 - 2591869 bp Length : 2019 bp Strand : + Note : - DNA sequence : ATGACATCTTCCTCCTCTTCCAAGAAAAGCCGTGCCGTTGCCCTACGAAATTATTTTTCCCCCTTCGGCAATAAATTGGT GGCGGGGGGCCATGTAGATGCTGAACAATTGCGACAGGCCCTAGTCCAGGTGAAAAAAACTGGGCGGTCTTTGCCCGAGG AACTTAAGGCAGTCACTGGCCGAGAATTGTCCCCAGAACTACTGCGGCAGTACAAAAAAAATCAGTTATTTGAGCTCAAA GTACTTTACGGGGTGGACAGCGTCGATCCGGAGGTTGCCCCGATCGCCACCCAGCAAATGGCCGAGTTGATTGGGCGATT TTTTCCTTTGGATACTTGTCGGCGATTCAAGTTTTTGCCCTTAGCCCAGCAGGAAGGCGACCCCCCCAGTGTGCTAGTGG CCATGGTGGACCCCGATAACTTGGCTGCCCAGGACGAGCTAAACCGAATTTTGCGGGTTAAAGGTTTTGAATTGCGCCGC TTGGTGGTCACCCAAGATGATTTTAACCAACTGTTGGAACAGTACTATGCCATCCGGGAAGAGTGGGAGGCGGCCCAGGA AAAAAGGGACCAGGAAAGGGCCCTTGATAAACTTAATGATTTGACGGATATTGTCGGCTCCATCGACATGAATCTGGGGG AGGACAAAGAAGATGTAGATAATGCTCTAGACTCCAACGATGCTAACCAAGCACCGGTGATTAACCTGGTCAACAAAATT TTGGCTAAGGCTCTCCAGGAAGGAACTTCCGACATTCACGTGGAGCCGCAGGAAGAAACCCTGAGAATTCGTTTCCGCAA GGATGGGGTTTTAAATCAGGCTTTCGATCCCCTGCCCCGCAAAATTACCCCCGCCGTGGTGGCCCGTTTTAAAATTATGG CGGACATGGACATTGCGGAGAGGCGATCGCCCCAGGATGGCAAAATTCGCCGTATTTACCAGGGCAGGAAGGTGGATTTT CGGGTTAATACCCTACCCAGCCGCTATGGGGAAAAGGTTTGTTTGCGGATTTTGGACAACTCCGCCACTCAGTTGGGCTT AGATTTTCTAATCACTAACCCCGAAACCCTACAAACGGTAAGGGAATTGGCCGCCCGGCCCTATGGCTTAATGTTGGTGA CGGGGCCCACCGGATCGGGAAAATCCACCACCCTCTACTCGGTGTTGGCGGAACGCAATAGCCCCGAGGTGAATATCAAC ACAGCGGAGGACCCGATTGAGTATGCTCTACCGGGCATTACCCAAGTGCAGGTGATTCGGGAAAAGGGCATGGATTTTTC CAATATTCTGCGGGCATTTATGCGTCAGGATCCCGATGTGATTCTGGTGGGGGAAACCAGGGATAAGGAGACGGCCAAAA CGGCCATTGAGGCGGCTCTGACTGGACACTTAGTTCTCACTACTCTCCACACCAATGATGCGGCCGGGGCGATCGCCAGA TTGGATGAAATGGGAGTGGAGCCGTTTATGGTTTCTGGGTCATTGTTGGGGGTGTTGGCCCAACGGCTGATGCGGAAAGT TTGTACGGAATGTCGCATTGCTTACCACCCTAGCAAGGAAGAATTGTCCCGCTTTGGGCTGTCCGCTTCCGGGGATGAAG TGGTTACTTTTTATAAAGCCAATTCCCTCAGTCCCGACGAAATCCATCTTGCCCGTCAAAAAGGTAATTTATGTCAAAAA TGTAGTGGCAGTGGCTATAAGGGTCGGGTGGGGGTCTATGAGGTGATGCGTAATTCTGAGCGTATTGCTGAATTGATTAA CCAGGGGGCCACCACTGACCGCATTAAGGATTGTGCGGTGGAAGAGGGCATGATCACCCTATTGGCCTATAGTCTTAATT TAGTGCAGGAAGGCTACACCACCCTAGAGGAGGTGGAACGGGTCACTTTCACCGATACCGGACTGGAGTCAGAAATGCGG GCTAAGCGCAAGAGTGCTTTAACCTGTCGTACGTGTGCGGCGGAACTGCAACAGGAATGGCTTGATTGTCCCTATTGCAT GACTTCCCGGTTTAGCTAA Protein sequence : MTSSSSSKKSRAVALRNYFSPFGNKLVAGGHVDAEQLRQALVQVKKTGRSLPEELKAVTGRELSPELLRQYKKNQLFELK VLYGVDSVDPEVAPIATQQMAELIGRFFPLDTCRRFKFLPLAQQEGDPPSVLVAMVDPDNLAAQDELNRILRVKGFELRR LVVTQDDFNQLLEQYYAIREEWEAAQEKRDQERALDKLNDLTDIVGSIDMNLGEDKEDVDNALDSNDANQAPVINLVNKI LAKALQEGTSDIHVEPQEETLRIRFRKDGVLNQAFDPLPRKITPAVVARFKIMADMDIAERRSPQDGKIRRIYQGRKVDF RVNTLPSRYGEKVCLRILDNSATQLGLDFLITNPETLQTVRELAARPYGLMLVTGPTGSGKSTTLYSVLAERNSPEVNIN TAEDPIEYALPGITQVQVIREKGMDFSNILRAFMRQDPDVILVGETRDKETAKTAIEAALTGHLVLTTLHTNDAAGAIAR LDEMGVEPFMVSGSLLGVLAQRLMRKVCTECRIAYHPSKEELSRFGLSASGDEVVTFYKANSLSPDEIHLARQKGNLCQK CSGSGYKGRVGVYEVMRNSERIAELINQGATTDRIKDCAVEEGMITLLAYSLNLVQEGYTTLEEVERVTFTDTGLESEMR AKRKSALTCRTCAAELQQEWLDCPYCMTSRFS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-74 | 42 |
gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-74 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
gspE | NP_442222.1 | general secretion pathway protein E | VFG0182 | Protein | 2e-70 | 42 |
gspE | NP_442222.1 | general secretion pathway protein E | VFG2048 | Protein | 8e-74 | 41 |