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Name : clpC (sll0020) Accession : NP_442112.1 Strain : Synechocystis sp. PCC 6803 Genome accession: NC_000911 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease regulatory subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2466407 - 2468872 bp Length : 2466 bp Strand : - Note : - DNA sequence : ATGTTTGAACGCTTTACAGAAAAAGCCATTAAAGTAATCATGCTTGCTCAGGAGGAAGCTCGTCGCCTCGGACATAACTT CGTTGGCACGGAACAAATTCTGCTCGGCTTGATTGGCGAAGGGACTGGCGTCGCCGCCAAGGTTCTCAAATCCATGGGGG TTAATCTCAAAGATGCCCGCATCGAAGTAGAAAAAATTATCGGGCGGGGATCGGGCTTTGTGGCCGTGGAAATCCCCTTT ACTCCCCGGGCCAAGCGGGTGCTGGAACTTTCCCTTGAGGAGGCTCGGCAACTGGGTCACAATTACATTGGCACCGAACA CCTGCTGTTGGGTCTGATTCGAGAAGGGGAAGGGGTAGCTGCTCGGGTCCTAGAAAACCTTGGGGTTGATCTCTCCAAAG TCCGCACCCAGGTGATCCGCATGTTGGGAGAAACGGCCGAAGTAGCTGCCGGTGGTGGCAGTGGTGGTCGCACCAAAACC CCTACCTTAGATGAGTTTGGCTCTAACCTCACCCAGATGGCCGCCGAAGGGAAGTTAGACCCGGTGGTAGGTCGCCAAAA AGAAATTGAGAGGGTGATTCAGATCCTCGGCCGCCGCACCAAGAATAACCCCGTCCTGATTGGGGAGCCGGGGGTTGGTA AAACGGCAATCGCCGAAGGTTTGGCCCAGCGCATTGCCAACAAAGATATTCCCGACATCCTCGAAGAAAAACGGGTCGTC ACCCTGGACATCGGTCTATTGGTGGCCGGCACTAAATACCGGGGGGAATTTGAGGAACGGCTGAAAAAAATCATGGATGA AATCCGCCAAGCCGGTAACATCATCCTGGTGATTGACGAAGTTCATACCCTAATCGGAGCCGGAGCCGCCGAGGGGGCGA TCGACGCTGCCAATATTCTCAAGCCCGCCCTAGCCCGGGGAGAATTGCAATGTATTGGTGCCACCACCCTGGATGAGTAC CGCAAACACATTGAACGGGACGCAGCCCTGGAGCGTCGTTTTCAACCGGTGATGGTGGGGGAACCCTCCGTGGAAGAAAC CATCGAGATTCTTTACGGTCTGCGGGAACGTTACGAACAGCACCACAAACTGAAAATTTTGGACGAAGCCCTGGAAGCCG CCGCCAAACTTTCCGACCGTTACATCTCCGACCGCTTCCTGCCCGATAAGGCGATCGATCTAATTGACGAAGCTGGTTCC CGGGTGCGGTTGATTAATTCCCAATTGCCCCCCGCCGCCAAGGAGTTGGACAAGGAATTGCGACAGATTCTTAAAGAAAA AGATGATGCTGTCCGCAACCAGGACTTCGAGCAAGCCGGGGAACTCAAGGACCGGGAAGACGAAATTAAAAAACAAATCC GGGCGATCGCCTCTTCCAAAAAAGCGGAAGGGGATAACGGCGAGCCGGAAGTGACCTCCGAAGAAATTGCCCACATCGTC GCCTCCTGGACAGGGGTGCCGGTGAACAAGCTAACGGAATCCGAGTCAGAAAAACTGTTGCATATGGAAGATACCCTCCA TCAACGGTTAATTGGCCAGGAAGATGCGGTTAAGGCCGTTTCCCGCGCTATCCGTCGGGCCAGGGTCGGGCTGAAAAATC CCAACCGTCCCATTGCCAGCTTTATTTTCTCCGGTCCCACTGGGGTAGGTAAAACCGAGTTGACCAAAGCTCTGGCGGCT TACTTCTTCGGTTCCGAGGAAGCCATGATCCGTCTGGATATGTCGGAATTTATGGAACGACACACCGTTTCCAAATTAAT TGGTTCCCCTCCGGGTTATGTGGGCTACAACGAAGGCGGTCAGTTGACGGAAGCAGTACGTCGCCGTCCCTACACGGTGG TGCTGTTCGACGAAATTGAAAAAGCCCACCCCGACATCTTCAATATGCTTCTGCAAATTTTGGAAGATGGTCGCCTCACC GATGCCAAGGGTCGCACAGTGGATTTCAAAAATACCCTGTTGATCATGACCTCCAACATTGGTTCCAAGGTAATTGAAAA AGGTGGCGGTGGTTTGGGCTTTGACTTTGCCGATGACCAAGCGGAGTCTCAGTACAATCGCATTCGTTCCTTGGTGAATG AAGAGTTGAAAAACTACTTCCGCCCTGAGTTCTTGAATCGTTTGGATGAAATTATCGTCTTCCGCCAATTGAACAAGGAG GAAGTCAAGGAAATTTCGGAAATTCTCCTACGGGATGTGTTTGCCCGGTTGGTGGAAAAAGAAATTTCTCTCCAGGTCAC CGACAAGTTCAAGGAGCGCATTGTGGAAGAAGGGTTCAACCCAGCCTACGGTGCCCGTCCCCTCCGTCGGGCCATTATGC GCCTGTTGGAAGACGTGTTAGCCGAAGAAATTCTTTCCGGCCGCCTCAAGGAAGGTAGCCAAGCGCTGGTGGACATTGGT GAAGACAACCAAGTGGTGGTCATCCCCGGTGAAACGAGGGAACTGATTGCCCCCGGCGTTGAATAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVAAGGGSGGRTKT PTLDEFGSNLTQMAAEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVV TLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY RKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGS RVRLINSQLPPAAKELDKELRQILKEKDDAVRNQDFEQAGELKDREDEIKKQIRAIASSKKAEGDNGEPEVTSEEIAHIV ASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAA YFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGRLT DAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFDFADDQAESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLNKE EVKEISEILLRDVFARLVEKEISLQVTDKFKERIVEEGFNPAYGARPLRRAIMRLLEDVLAEEILSGRLKEGSQALVDIG EDNQVVVIPGETRELIAPGVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | NP_442112.1 | ATP-dependent Clp protease regulatory subunit | VFG0079 | Protein | 0.0 | 61 |
| clpC | NP_442112.1 | ATP-dependent Clp protease regulatory subunit | VFG0080 | Protein | 5e-152 | 51 |
