Gene Information

Name : hemC (slr1887)
Accession : NP_441025.1
Strain : Synechocystis sp. PCC 6803
Genome accession: NC_000911
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1247192 - 1248154 bp
Length : 963 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGACTGTTTCGACCTCTGCTCCCACAGTTCGGATAGGCTCACGGAAAAGCCAACTAGCCCTCGTGCAAACCTATTGGGT
GCAGGAAGAATTGCAAAAACACTTCCCCGATCGCCAATTCGATGTCGAAACCATGGAAACCCAGGGGGATAAAATCCTCG
ATGTGGCCCTAGCAAAAATTGGGGATAAGGGACTATTCACCCAAGAACTTGAAGACGGCATGTTGGGAAAAAGAACCGAC
TTAGCTGTTCACTCCCTCAAAGATTTGCCCACTAATTTGCCAGCGGGCTTGATGCTGGGCTGCGTGACCAAACGGGTTAA
TCCCGCCGACGCTTTGGTTTTAAATGCTAAACACCAAGGCAAAGATTTGGCTTCCTTGCCGGAAGGGGCGGTGATTGGCA
CCTCTTCCCTCCGTCGTTTGGCCCAACTGCGCTACCACTTTCCCCATTTAACCTTTAAGGATGTGCGGGGCAACGTTAAT
ACCCGTTTGGCCAAATTGGATAGTAATGAGTACGATGCCATCATTCTGGCCGCCGCTGGTTTGGAACGGTTAGACATGGC
CAATCGCATTGACCAACTAATTCCCCCGGAAATTTCTCTCCATGCTGTGGGTCAAGGGGCTTTGGGCATCGAGTGTCGTG
AAGGCGATCAAGAAATTCTCAGCCTGTTGAAAGTGTTGGAAGACGAAAATAGCCGGGATCGTTGCTTAGCGGAACGGGCC
TTTTTGCGCCAACTAGAAGGGGGGTGCCAAGTGCCTATCGGTGTTAATACCCATTTAGATGGCGACAATTTAACCCTTAC
CGGCATGGTGGCCAGTTTGGATGGCCAAAGGTTAATTAAAGATACCCTCAGCGCTCCCCGGAAAGAAGCGGAAAAATTGG
GTCAGGATCTTGCCCTCAAACTCCGGGAACAGGGAGCAGGGGAAATCCTAGCGGAAATCTTAGCGGAAGCTGGCCGGGGA
TAA

Protein sequence :
MTVSTSAPTVRIGSRKSQLALVQTYWVQEELQKHFPDRQFDVETMETQGDKILDVALAKIGDKGLFTQELEDGMLGKRTD
LAVHSLKDLPTNLPAGLMLGCVTKRVNPADALVLNAKHQGKDLASLPEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVN
TRLAKLDSNEYDAIILAAAGLERLDMANRIDQLIPPEISLHAVGQGALGIECREGDQEILSLLKVLEDENSRDRCLAERA
FLRQLEGGCQVPIGVNTHLDGDNLTLTGMVASLDGQRLIKDTLSAPRKEAEKLGQDLALKLREQGAGEILAEILAEAGRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-57 51
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-57 51