Gene Information

Name : pykF (sll1275)
Accession : NP_440894.1
Strain : Synechocystis sp. PCC 6803
Genome accession: NC_000911
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1102283 - 1104058 bp
Length : 1776 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGCAAACGTCTCCCCTTCCCCGTCGTACCAAAATCGTCGCTACCATTGGCCCCGCGACCCAAAGCAAGGAAGTGCTGAG
ACAACTGATCCAAGCCGGTGCTACCACTTTCCGCCTCAATTTTTCCCACGGAGACCACGCTTACCACCAACAAAGTATCC
GTTTGATTCGCCAGATTGCCTTTGAACTGAACCAACCAGTGGGCATTCTCCAGGATTTACAGGGGCCAAAGATTCGGGTG
GGCAAATTTCTCAATGATGCCGGCTCTGTGCAACTCAAAAACGGTGATCCCTATACCCTCACCAGTCGCCCGGTGGAATG
TACGGAAACCATTAGTTCCATTAGCTACGAATATTTAGCCGACGAAGTACCTTCTGGGGCAAGAATTTTGCTCGACGACG
GCAAACTGGAAATGTTGGTGGAGGAAGTGGACACTGTTGCCCGGGATCTCCACTGTCGGGTGATTGTGGGGGGAACCCTT
TCCAGCAATAAAGGGGTTAATTTTCCCGGGGTCTGCCTTTCCGTTAAGGCCATGACCGATAAAGATAAGGAAGATTTGAT
GTTCGGGCTGGACCAAGGGGTGGACTGGGTGGCCCTGAGTTTTGTTCGTAATCCCCAGGATATTGATGAGATTAAGGGGT
TAATTGCGGCGGCAGGGAAATCCGTGCCGGTAATCGCCAAAATTGAGAAGCACGAAGCGATTAAGGATATGCAGGCGGTG
CTGGAAAAATGTGACGGTGTCATGGTGGCCCGGGGGGACTTGGGGGTAGAACTACCCGCAGAAGATGTACCTATTTTGCA
AAAGAAACTCATTGCCACTGCTAACCGGTTGGGCATTCCTGTCATTACTGCTACCCAAATGTTGGACAGTATGGTCAACA
GCCCCCGACCTACTAGGGCTGAAGTGTCCGACGTGGCCAATGCCATCCTCGATGGTACCGATGCGGTGATGCTCTCCAAC
GAAACGGCGATCGGTAAATTTCCCGTGGAAGCAGTGGCTATTATGGCCAAAATTGCGGAGCGCATTGAACAGGAAGATAT
CAATCCTTCCCAAGCGGAAGCCAGTCGCACTTCTATTCCCAATGCTATTTCCAGCGCCGTTAGCCAGATTGCGGAAACCC
TCAACGCGGCGGCTATTATGTCTTTGACTAAGACCGGATCCACCGCCCGCCATGTGTCAAAGTTCCGCCCCAAAACCCCC
ATTCTGGCCGTTACGCCCCATGTGGATGTGTCCCGTCAGTTGCAGTTGGTGTGGGGAGTTAAGCCCCTGTTGGTATTGGA
TTTACCTTCCACCAGCCAAACGTTCCAAGCCGCCATTAACGTGGCCCAGGAAAACCATTTTCTCCGGGATGGAGATTTGG
TGGTGATGACCGCCGGGACATTGCAGGGAGTTGCCGGTTCGACGGATTTAATCAAAGTGGAAGTGGTCAAGGCCATTCTT
GGTCGGGGTGTAGGTATTGGCCAAGGAGCTGTAAGTGGCCGGGCCAGGGTTGCCAGTCGTCCCCAGGCGATCGCCCAATT
TACCCAGGGAGAAATTTTAGTAGTTCCCTCTACCAACGCTGATTGTGTGGACATGATGCGACGGGCGGCGGGCATTATCA
CCGAAGAAGAAAGCCTGACTAGCCATGCGGCCATTATTGGTTTGCGGCTGGGGGTGCCGGTCATTGTGGGTTTTAAAGGC
GCTACCCAAAAGATTCGAGATGGAGCCATTGTCACCATCGATGCCCAAAAAGGACTGATTTATTCCGGTGCATTACCCCC
GGTGTCCAAAGGATAG

Protein sequence :
MQTSPLPRRTKIVATIGPATQSKEVLRQLIQAGATTFRLNFSHGDHAYHQQSIRLIRQIAFELNQPVGILQDLQGPKIRV
GKFLNDAGSVQLKNGDPYTLTSRPVECTETISSISYEYLADEVPSGARILLDDGKLEMLVEEVDTVARDLHCRVIVGGTL
SSNKGVNFPGVCLSVKAMTDKDKEDLMFGLDQGVDWVALSFVRNPQDIDEIKGLIAAAGKSVPVIAKIEKHEAIKDMQAV
LEKCDGVMVARGDLGVELPAEDVPILQKKLIATANRLGIPVITATQMLDSMVNSPRPTRAEVSDVANAILDGTDAVMLSN
ETAIGKFPVEAVAIMAKIAERIEQEDINPSQAEASRTSIPNAISSAVSQIAETLNAAAIMSLTKTGSTARHVSKFRPKTP
ILAVTPHVDVSRQLQLVWGVKPLLVLDLPSTSQTFQAAINVAQENHFLRDGDLVVMTAGTLQGVAGSTDLIKVEVVKAIL
GRGVGIGQGAVSGRARVASRPQAIAQFTQGEILVVPSTNADCVDMMRRAAGIITEEESLTSHAAIIGLRLGVPVIVGFKG
ATQKIRDGAIVTIDAQKGLIYSGALPPVSKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-85 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-85 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-85 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 7e-85 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF NP_440894.1 pyruvate kinase VFG0479 Protein 7e-86 43