Gene Information

Name : MJ_0677 (MJ_0677)
Accession : NP_247661.1
Strain : Methanocaldococcus jannaschii DSM 2661
Genome accession: NC_000909
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 603197 - 604189 bp
Length : 993 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGAAAAAAGGAACTGACTTATTAAAGAAAGGATTTGCCAAGATGGTTAAGCATGGGGTTGTAATGGATGTTACCAACGT
AGAACAAGCACAAATAGCCGAAGAGGCTGGAGCTGTTGCAGTTATGGCTTTGGAGAGAGTTCCTGCGGATATTAGGGCAG
CTGGTGGAGTTGCAAGAATGTCAGACCCAGCTTTAATTGAAGAGATAATGGATGCTGTCTCAATTCCAGTTATGGCTAAG
TGTAGAATTGGACATACAACAGAGGCTTTAGTTTTAGAGGCTATTGGAGTAGATATGATTGATGAAAGTGAAGTTTTAAC
CCAAGCAGACCCATTCTTCCACATATACAAGAAGAAGTTTAACGTCCCATTTGTCTGTGGAGCAAGAAACTTAGGAGAGG
CAGTTAGAAGAATCTGGGAAGGAGCGGCAATGATAAGAACTAAGGGAGAGGCAGGGACTGGAAATATAGTTGAGGCAGTT
AGACACATGAGATTGATGAATGAAGCTATAGCTCAATTGCAGAGAATGACAGATGAAGAAGTTTATGGAGTTGCTAAATT
CTATGCTAACAGATATGCAGAATTAGCTAAGACAGTTAGAGAGGGAATGGGGTTGCCAGCAACTGTTTTAGAAAATGAGC
CAATCTATGAGGGCTTTACACTGGCTGAGATTATTGATGGGTTGTATGAGGTTTTATTAGAAGTTAAAAAATTAGGAAGA
TTGCCAGTAGTTAATTTTGCAGCTGGTGGGGTTGCAACACCGGCAGATGCTGCTTTAATGATGCAGCTTGGTTCTGATGG
AGTATTTGTTGGTTCAGGAATATTTAAATCAGAAAATCCATTGGAGAGAGCAAGGGCAATTGTTGAAGCTACTTATAACT
ATGATAAGCCTGATATTGTTGCTGAAGTTAGTAAGAATTTAGGAGAAGCTATGAAAGGAATAGATATAACTCAAATAAGC
GAAGCTGAGAAAATGCAATATAGAGGAGATTAA

Protein sequence :
MKKGTDLLKKGFAKMVKHGVVMDVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAVSIPVMAK
CRIGHTTEALVLEAIGVDMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAV
RHMRLMNEAIAQLQRMTDEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGR
LPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNYDKPDIVAEVSKNLGEAMKGIDITQIS
EAEKMQYRGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-64 56
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-64 55
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-64 55